Pairwise Alignments

Query, 248 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 238 a.a., High-affinity branched-chain amino acid transport ATP-binding protein LivF from Pseudomonas lactucae CFBP13502

 Score = 86.3 bits (212), Expect = 5e-22
 Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 16/240 (6%)

Query: 1   MLQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNI 60
           +L+I+DL V  G  + LK + L I +GE+  L G NGAGKSTLL +I G P+ E   G I
Sbjct: 5   ILEIKDLDVFYGPIQALKKVSLQINEGETVSLIGSNGAGKSTLLMSIFGQPRAE--SGQI 62

Query: 61  YFKGKDITDMPMHERAQLGIGISYQSPPAISGVRLET-----MINAISKRSDEEMEEMAK 115
            + G DIT    H  A  GI  S +       + +E       I    K + E+M+ M +
Sbjct: 63  IYNGVDITHKSSHYIASNGIAQSPEGRRVFPDMTVEENLLMGTIPIGDKFASEDMQRMFE 122

Query: 116 RLNIRHFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSGVDVENVELLGGIINH 175
                   +    +  SGGE +   + +     P L++ DEP  G+    V+ +   +  
Sbjct: 123 LFPRLKERRNQRAMTMSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPIVVKQIFATLRE 182

Query: 176 LLDKDRKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTPDEIL-NEIIKNGY 234
           L       S      L+  +  + L     D+A+V+++G I  +GT  E+L NE ++N Y
Sbjct: 183 L------ASTGMTIFLVEQNANHALRLS--DRAYVMVNGEIRLTGTGKELLVNEEVRNAY 234