Pairwise Alignments

Query, 248 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 248 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Acinetobacter radioresistens SK82

 Score =  103 bits (256), Expect = 4e-27
 Identities = 73/242 (30%), Positives = 124/242 (51%), Gaps = 20/242 (8%)

Query: 2   LQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNIY 61
           L I+ L+     + ++KD+   ++ G+   L GPNGAGK+T    ++G  + +  +G I+
Sbjct: 11  LTIKHLAKNYNKRWVVKDVSFSMQSGQIVGLLGPNGAGKTTSFYMVVGLVRMD--KGEIH 68

Query: 62  FKGKDITDMPMHERAQLGIGISYQSPPAISGVRLETMINAISK-RSDEEMEEMAKRLN-- 118
               D++D+ MHERA+ GIG   Q       + +   I AI + R D   ++  +RLN  
Sbjct: 69  LDHLDLSDLAMHERARKGIGYLPQEASIFRKLTIAENIMAILETRRDLNKQQRQQRLNEL 128

Query: 119 -----IRHFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSGVDVENVELLGGII 173
                I H  +  L +  SGGE +R+E+ +  A +P  ++ DEP +GVD  +V  +  II
Sbjct: 129 LNDFKITHI-KDSLGMSVSGGERRRAEIARALAADPKFMLLDEPFAGVDPISVGDIKDII 187

Query: 174 NHLLDKDRKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTPDEIL-NEIIKN 232
            +L ++          G++IT           +KA+++ +G +   GTP EIL NE ++ 
Sbjct: 188 RNLKERG--------IGVLITDHNVRETLAICEKAYIVSEGAVIAEGTPQEILENETVRQ 239

Query: 233 GY 234
            Y
Sbjct: 240 VY 241