Pairwise Alignments

Query, 723 a.a., heavy metal translocating P-type ATPase from Methanococcus maripaludis S2

Subject, 834 a.a., copper-exporting P-type ATPase CopA from Escherichia coli ECRC100

 Score =  455 bits (1171), Expect = e-132
 Identities = 262/740 (35%), Positives = 434/740 (58%), Gaps = 31/740 (4%)

Query: 4   KLKISGMTCAVCVKTIEKSVSKMDGVESIVVNLLDESAVINFDEKFVSIEDIGIKIERLG 63
           +L +SGM+CA CV  ++ ++  + GV    VNL + +A++       S +D+   +E+ G
Sbjct: 102 QLLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGS---ASPQDLVQAVEKAG 158

Query: 64  YEVLGIAEEIEELPDKEDELKEKLKKIIVGAVFSIALF-----------SMMYIEIPYKP 112
           Y    I ++ +    +++     +K+    A+ ++A+            +MM        
Sbjct: 159 YGAEAIEDDAKRRERQQETAVATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSL 218

Query: 113 YLAF-LVSLPPLLYIALPIFKAGFNSFRVKSLNMDVMYSLGMGVAYISALLVTLG--LLP 169
           +L   L++L  +++     +++ + S    +  MD + +LG GVA++ ++ V L     P
Sbjct: 219 WLVIGLITLAVMVFAGGHFYRSAWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQWFP 278

Query: 170 MN--FMFYDTTIMLATLLTLGRYLEERAKGRTSEAIKKLMGLQVKTAKVIRNNEELEIPI 227
           M    ++Y+ + M+  L+ LG  LE RA+ R+S+A++KL+ L   TA+++ +  E  +P+
Sbjct: 279 MEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARLVTDEGEKSVPL 338

Query: 228 ENVIVGDILLIRPGEKIAVDGTVFEGDSYVDESMITGEPIPNPKKKGDSVIGGTINKNGI 287
             V  G +L +  G+++ VDG + +G++++DE+M+TGEPIP  K +GDSV  GT+ ++G 
Sbjct: 339 AEVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGS 398

Query: 288 LKITAEKIGKDTVLSQIIQLVKNAQISKPDIQNLADKAVSYFIPVVFTIALISSLYWFFN 347
           +   A  +G  T LS+II++V+ AQ SKP+I  LADK  + F+PVV  IAL+S+  W+F 
Sbjct: 399 VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF 458

Query: 348 GGILLAVTTFI---SVMVIACPCALGLATPTAITVGVGRGAELGILIKDSKVFDVAGNLK 404
           G     V T +   +V++IACPCALGLATP +I  GVGR AE G+L++D+     A  L 
Sbjct: 459 GPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLD 518

Query: 405 CMIFDKTGTITKGEPEVDEI--ISDYSKEEVLLIAGTLEKNSEHPLALAILKKAEELNIS 462
            ++FDKTGT+T+G+P+V  +   +D+ + + L +A  LE+ S HPLA AIL KA ++   
Sbjct: 519 TVVFDKTGTLTEGKPQVVAVKTFADFDEAQALRLAAALEQGSSHPLARAILDKASDM--Q 576

Query: 463 LSEPEKFESITGMGIIGTLKDLRVLIGNRRLMEENNISINEEYNKEISRLEENAKTVIIV 522
           L +   F ++ G+G+ G  +   +L+GN+ L+ +  +   +    +IS       T +++
Sbjct: 577 LPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNDQQVD-TKAIEADISAQASQGATPVLL 635

Query: 523 GVENKILGIIAISDKIKENAKITVQNLREIGIESYMVTGDNEKTAKVIGKEVGILENHVF 582
            V+ K + ++A+ D ++ ++   +Q L + G    M+TGDN  TA  I KE GI  + V 
Sbjct: 636 AVDGKAVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI--DEVI 693

Query: 583 SNVLPEKKAEIVKSIKENAGGYVEFIGDGINDAPALSTADVGIAVGSGTDIAIESGEVVL 642
           + VLP+ KAE +K + ++ G  V  +GDGINDAPAL+ ADVGIA+G G+D+AIE+  + L
Sbjct: 694 AGVLPDGKAEAIKRL-QSEGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITL 752

Query: 643 MNDDLKYVTGFVKLSKRVLKQIKLNLFWAFAYNSILIPVAAGALYSY-NIRFEPELAAFA 701
           M   L  V   + +S+  L+ +K NL  AF YNSI IPVAAG L+ +      P +A  A
Sbjct: 753 MRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWPFTGTLLNPVVAGAA 812

Query: 702 MTLSSITIIGLSLLLKRYDP 721
           M LSSIT++  +  L R+ P
Sbjct: 813 MALSSITVVSNANRLLRFKP 832



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 10/36 (27%), Positives = 22/36 (61%)

Query: 3  VKLKISGMTCAVCVKTIEKSVSKMDGVESIVVNLLD 38
          + L + G++C  CVK +++S+ +   VE   V++ +
Sbjct: 5  IDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITE 40