Pairwise Alignments

Query, 723 a.a., heavy metal translocating P-type ATPase from Methanococcus maripaludis S2

Subject, 938 a.a., copper-exporting P-type ATPase CopA from Dickeya dianthicola ME23

 Score =  432 bits (1110), Expect = e-125
 Identities = 260/744 (34%), Positives = 427/744 (57%), Gaps = 33/744 (4%)

Query: 3   VKLKISGMTCAVCVKTIEKSVSKMDGVESIVVNLLDESAVINFDEKFVSIEDIGIKIERL 62
           V+L +SGM+CA CV  +++++ ++ GV    VNL + SA+++ +    ++ D    ++  
Sbjct: 195 VQLLLSGMSCASCVSRVQQALQRVPGVTQARVNLAERSALVSGNTSHQALIDA---VQNA 251

Query: 63  GYEVLGIAEEIEELPDKEDELKEKLKKIIVGAVFSIALF-----------SMMYIEIPYK 111
           GY    I +E E    +E   ++ +++    A   +AL            +MM  +    
Sbjct: 252 GYGAEIILDEAERRARQEQTSRQSIRRFRWQAALGLALGIPLMVWSMIGDNMMLTDDNRS 311

Query: 112 PYLAFL-VSLPPLLYIALPIFKAGFNSFRVKSLNMDVMYSLGMGVAYISALLVTLG--LL 168
            +L    ++L  ++      ++  + S    S  MD + +LG G A++ ++ V L     
Sbjct: 312 GWLLVGGLTLAVMIAAGGHFYRNAWRSLLNGSATMDTLVALGTGAAWLYSITVNLWPTWF 371

Query: 169 PMN--FMFYDTTIMLATLLTLGRYLEERAKGRTSEAIKKLMGLQVKTAKVIRNNEELEIP 226
           PM    ++Y+ + M+  L+ LG  LE+RA+ R+S+A+++L+ L   TA+++    +  IP
Sbjct: 372 PMEARHLYYEASAMIIGLINLGHALEQRARQRSSQALERLLDLTPPTARLVTPQGDRVIP 431

Query: 227 IENVIVGDILLIRPGEKIAVDGTVFEGDSYVDESMITGEPIPNPKKKGDSVIGGTINKNG 286
           + +V  G  L +  G++I VDG + +G+ ++DE+M+TGEPIP  K  GD V  GT  ++G
Sbjct: 432 LADVQTGMTLRLTTGDRIPVDGMLEQGELWIDEAMLTGEPIPQQKAAGDKVHAGTQVQDG 491

Query: 287 ILKITAEKIGKDTVLSQIIQLVKNAQISKPDIQNLADKAVSYFIPVVFTIALISSLYWFF 346
              + A  IG  T L++II LV+ AQ SKP I  LAD+  + F+PVV  IAL+S   W+ 
Sbjct: 492 SATLRAGAIGNQTTLARIIHLVRQAQSSKPAIGQLADRISAVFVPVVVAIALLSGAIWYV 551

Query: 347 NGGILLAVTTFI---SVMVIACPCALGLATPTAITVGVGRGAELGILIKDSKVFDVAGNL 403
            G     V T +   +V++IACPCALGLATP +I  GVGR AELG+L++D+     A  L
Sbjct: 552 VGPAPHVVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAELGVLVRDADALQQASRL 611

Query: 404 KCMIFDKTGTITKGEPEVDEI--ISDYSKEEVLLIAGTLEKNSEHPLALAILKKAEELNI 461
             ++FDKTGT+T+G+P V  I    D S+ + L  A +LE+ + HPLA AI+++A+   +
Sbjct: 612 DVLVFDKTGTLTEGKPRVVAIQTFGDISESQALRWAASLEQGASHPLAQAIIQRAD--GV 669

Query: 462 SLSEPEKFESITGMGIIGTLKDLRVLIGNRRLMEENNISINEEYNKEISRLEENA---KT 518
            LS+  +F ++ G+G+ G +    +L+GN  L+ +  IS+ +  N     LE+ +    T
Sbjct: 670 ELSDVTQFRTLPGLGVSGQVDGASLLLGNPALLAQRQISLADGENAPRDGLEKQSALGMT 729

Query: 519 VIIVGVENKILGIIAISDKIKENAKITVQNLREIGIESYMVTGDNEKTAKVIGKEVGILE 578
            +++    ++  + ++ D +++++   +Q L   G +  M+TGDN  TA+ I +E GI  
Sbjct: 730 PVLLVANGQVAALFSVQDILRQDSVSALQRLHRQGYQLVMLTGDNPATAQAIAREAGI-- 787

Query: 579 NHVFSNVLPEKKAEIVKSIKENAGGYVEFIGDGINDAPALSTADVGIAVGSGTDIAIESG 638
           + V + VLP+ KA+ ++ + ++ G  V  IGDGINDAPAL+ ADVGIA+G G+DIA+E+ 
Sbjct: 788 DQVIAGVLPDGKADAIRHL-QSQGKRVAMIGDGINDAPALAQADVGIAMGGGSDIAVETA 846

Query: 639 EVVLMNDDLKYVTGFVKLSKRVLKQIKLNLFWAFAYNSILIPVAAGALYSY-NIRFEPEL 697
            + LM   L  V   + LS+  L  +K NL  AF YN++ IP+AAG LY        P +
Sbjct: 847 AMTLMRHSLHGVADALALSRATLANMKQNLLGAFVYNTLGIPIAAGVLYPLTGTLLNPVV 906

Query: 698 AAFAMTLSSITIIGLSLLLKRYDP 721
           A  AM LSSIT++  +  L R+ P
Sbjct: 907 AGAAMALSSITVVSNANRLLRFTP 930



 Score = 26.2 bits (56), Expect = 0.008
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 3   VKLKISGMTCAVCVKTIEKSVSKMDGVESIVVNL 36
           V L +SG+ C  CV +  K++  + GV +  V L
Sbjct: 71  VTLLLSGLNCQHCVASTRKALEAVPGVAATDVTL 104