Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 514 a.a., NADH-quinone oxidoreductase subunit C from Rhodanobacter sp000427505 FW510-R12

 Score = 94.4 bits (233), Expect = 7e-24
 Identities = 96/357 (26%), Positives = 149/357 (41%), Gaps = 23/357 (6%)

Query: 5   EIAIGPVHSTMLEPHRLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKIC 64
           E+  GPVH+  +EP R +L +  E V   E+ +G  H+G+ +  E L    A  L   IC
Sbjct: 159 EMTAGPVHAGTIEPGRFQLAVVGEKVLRLEVRLGYTHKGIAKRFEALAQRDAHRLAAHIC 218

Query: 65  GICSHIHLWS-AARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGHAFEILGHETM 123
           G  +    W+  A L  I  +   P RA  +R +  E ER+ +H    G     +G    
Sbjct: 219 GDSTVAFSWAYCAALESITASTPSP-RALVLRGLALERERIANHLGDLGGLANDVGFAFG 277

Query: 124 SMRCFMLREPIMQVFFEISGSRVHYSCPIIGGIRPRCNISETQIPHILDKISKYEEGLNK 183
             +   L+E +++   E+ G R  +   + GG+    ++    +P +LD+I+  E  + +
Sbjct: 278 QTQFSSLKEQLLRHNAELFGQRYLFDFVVPGGV--ASDLPARALPGMLDEIAALEHAVGE 335

Query: 184 FLERMLNDPMIISRVKDVGVMDRKTAAKFHAVGPTARGSNVKSDMR-KWGWVPEYDPYDF 242
                     +  R    G +    AA   A+G   R S V  D+R    W P YD    
Sbjct: 336 LRGIYARHEGLQDRFLGAGRLTPAQAAALGAIGLAGRASGVARDLRVDQPWSP-YDHSSP 394

Query: 243 DEILFDSGDVFARLAVRFYECLESVKIIRQALDALKDTSDKRIYNPNYELHEFKPIN--- 299
                  GDV AR+ VRF E L+S+++ RQ L AL          P  EL    P+    
Sbjct: 395 ALATSTEGDVAARVQVRFEETLQSLRLCRQWLQAL----------PAGELACDVPVAPAG 444

Query: 300 ----CYTEAQRGEQYYSYGLDDEGLVRQAKIRTPTATNLGAMEDIVKGYHVSDAELI 352
                  E  RG    +      G +R+ +   P+  N   +E  + G  V+D  LI
Sbjct: 445 QLGIGLIEGWRGPVMLALETGPAGGIRRCRAHDPSWQNWPLLEVAILGNIVADFPLI 501