Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 604 a.a., Uptake hydrogenase large subunit from Xanthobacter sp. DMC5

 Score = 54.3 bits (129), Expect = 9e-12
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 3/109 (2%)

Query: 6   IAIGPVHSTMLEPH-RLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKIC 64
           I + PV  T +E H R  + ++   +    ++ G   RG+E +++G     A    E+IC
Sbjct: 18  IVVDPV--TRIEGHMRCEVNVDSNNIIRNAVSTGTMWRGLEVILKGRDPRDAWAFVERIC 75

Query: 65  GICSHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGH 113
           G+C+  H  ++ R VE    I+IP  A  IR I+ ++ + H H + F H
Sbjct: 76  GVCTGCHALTSVRAVEDALQIKIPNNAFLIREIMAKVLQWHDHVVHFYH 124