Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 582 a.a., NADH-quinone oxidoreductase subunit C/D from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  101 bits (251), Expect = 6e-26
 Identities = 92/383 (24%), Positives = 160/383 (41%), Gaps = 28/383 (7%)

Query: 8   IGPVHSTMLEPHRLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKICGIC 67
           IGP H       R+ L ++ E + DA   IG +HRG E++ E           +++  + 
Sbjct: 203 IGPQHPGTHGVLRIVLQLDGEDIVDAIPDIGFHHRGQEKMAERQSWHTYLPYTDRVDYLG 262

Query: 68  SHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGHAFEILGHETMSMRC 127
             ++  +    VE    IE+PER   IR+++ EL R+ SH + +G   + +G  +     
Sbjct: 263 GVMNNLAYLMAVEKLAGIEVPERVKVIRVMLCELFRIASHLVWYGTFAQDVGQLSPVFYM 322

Query: 128 FMLREPIMQVFFEISGSRVHYSCPIIGGIRPRCNIS-ETQIPHILDKISKYEEGLNKFLE 186
           F  RE I  +   ++G R+H +   IGG+        ET + + L+   K    L ++  
Sbjct: 323 FTDREKIFDIVEAVTGGRMHPNWFRIGGVAQDLPKGWETLVQNFLNYFPKR---LKEYDN 379

Query: 187 RMLNDPMIISRVKDVGVMDRKTAAKFHAVGPTARGSNVKSDMRKWGWVPEYDPYDFDEIL 246
            ++ + +  +R K +G+   + A ++   GP  R      D RK      Y+ +DF+   
Sbjct: 380 MVMKNSLFKARTKGIGIFTLEEAIEWGVTGPNLRACGFAWDFRKKQPYSGYELFDFEVPT 439

Query: 247 FDSGDVFARLAVRFYECLESVKIIRQALDALKD---TSDKRIYNPNYELHEFKPINCY-- 301
             +GD + R  VR  E  +S+ I+ Q L  +      +D  +  P  + H    I     
Sbjct: 440 ASNGDCYDRAVVRVAEMRQSLHIVEQCLKNMPSGPYKADHPLTTPPIKQHTMHDIETLIT 499

Query: 302 -------------------TEAQRGEQYYSYGLDDEGLVRQAKIRTPTATNLGAMEDIVK 342
                               EA +G   Y    D      + +IRTP+  ++  +  I +
Sbjct: 500 HFLGVSWGPVMPAGEAMSCIEATKGANGYYVTSDGNTSPYRLRIRTPSFPHMQMLPYITR 559

Query: 343 GYHVSDAELIIASCDPCFTCTDR 365
           GY V+D   I+ + D      DR
Sbjct: 560 GYTVADLLSILGAMDYVLADIDR 582