Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 619 a.a., Uptake hydrogenase large subunit (EC 1.12.99.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 53.9 bits (128), Expect = 1e-11
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 3/109 (2%)

Query: 6   IAIGPVHSTMLEPH-RLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKIC 64
           I + PV  T +E H R  + ++   V    ++ G   RG+E +++G     A    E+IC
Sbjct: 18  IVVDPV--TRIEGHMRCEVNLDSNNVIRNAVSTGTMWRGLEVILKGRDPRDAWAFVERIC 75

Query: 65  GICSHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGH 113
           G+C+  H  ++ R VE    I+IP  A+ IR ++ +  ++H H + F H
Sbjct: 76  GVCTGCHALTSVRAVEDALGIKIPLNAHLIREMMAKTLQVHDHAVHFYH 124