Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 496 a.a., Ni/Fe hydrogenase subunit alpha from Magnetospirillum magneticum AMB-1

 Score = 43.9 bits (102), Expect = 1e-08
 Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 20/146 (13%)

Query: 39  VNHRGVERLMEGLPVEKACILCEKICGICSHIHLWSAARLVEIGCNIEI-PERANHIRII 97
           V  RG E+ +EG P  +  +L +++CGIC   H  +A++ +++  N  I    A  IR +
Sbjct: 51  VEFRGFEKFIEGRPYWEVPVLVQRLCGICPVSHHLAASKAMDMIVNGGILTPTAEKIRRL 110

Query: 98  VEELERLHSHT----------LLFGHAFEILGHETMSMRC---------FMLREPIMQVF 138
           +   + L SH           LLFG   ++     + +            +LR+   +V 
Sbjct: 111 MHYGQMLQSHALHFFHLSSPDLLFGFDSDVAKRNIVGVAAANPDVAKMGVLLRKFGQEVI 170

Query: 139 FEISGSRVHYSCPIIGGIRPRCNISE 164
              SG RVH +  + GG+       E
Sbjct: 171 RVTSGKRVHGTGSVPGGVNKSLTAEE 196