Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 505 a.a., hydrogenase expression protein HypE from Magnetospirillum magneticum AMB-1

 Score =  119 bits (298), Expect = 2e-31
 Identities = 90/359 (25%), Positives = 161/359 (44%), Gaps = 11/359 (3%)

Query: 5   EIAIGPVHSTMLEPHRLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKIC 64
           +I +GPVH+ ++EP   R   + E V   E  +G  H+G+E L++G P++KA  +  ++ 
Sbjct: 152 QIPVGPVHAGVIEPGHFRFHCQGEAVVRLEQRLGYQHKGIEGLLQGAPLDKAARIVARVS 211

Query: 65  GICSHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGHAFEILGHETMS 124
           G  +  +  + AR VE     E+P RA+ +R ++ E+ER+ +H    G          M 
Sbjct: 212 GDSTVAYSLAFARAVEAATGCEVPARAHWLRGVMAEMERVANHVFDIGAVCNDAAFAVML 271

Query: 125 MRCFMLREPIMQVFFEISGSRVHYSCPIIGGIRPRCNISETQIPHILDKISKYEEGLNKF 184
               +LRE +++    + G R++    + GG+    ++S+  +  +   +  + + L + 
Sbjct: 272 SHMGVLREKVLRANDVLFGHRLNMDRIVPGGV--SLDLSDEGVEALKHLLYGFGKLLEQG 329

Query: 185 LERMLNDPMIISRVKDVGVMDRKTAAKFHAVGPTARGSNVKSDMRKWGWVPEYDPYDFDE 244
            +   N P +  R    G++      +F A G   R S    D R+    P YD  D   
Sbjct: 330 YQLYENTPSLSDRTVSTGIVQTSLIHRFGAGGFVGRASGRGHDARETPSYPPYDKLDMTV 389

Query: 245 ILFDSGDVFARLAVRFYECLESVKIIRQALDALKDTSDKRIYNPNYELHEFKPINCYTEA 304
            +   GDV AR+ VRF E  ES+ +I + L  + + +  R+  P              E+
Sbjct: 390 PVLTEGDVNARVLVRFAEAKESLHLINRMLHEMPEGA-VRVPLPEVAGEGMG----VAES 444

Query: 305 QRGEQYYSYGLDDEGLVRQAKIRTPTATNLGAMEDIVKGYHVSDAELIIASCDPCFTCT 363
            RGE      L  + +V +     P+      +E  ++G  V+D  L    C+  F C+
Sbjct: 445 FRGEVVVWLRLGADHVVERCHPHDPSWFQWPLLEAAIEGNIVADFPL----CNKSFNCS 499