Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 569 a.a., Ni,Fe-hydrogenase III large subunit from Enterobacter asburiae PDN3

 Score =  165 bits (417), Expect = 3e-45
 Identities = 118/374 (31%), Positives = 179/374 (47%), Gaps = 12/374 (3%)

Query: 6   IAIGPVHSTMLEPHRLRLFIEDEIVKDAELTIGVNHRGVERLMEG-LPVEKACILCEKIC 64
           + IGP+H T  EP   RLF++ E + DA+  +   HRG+E+L E  +   +   L +++C
Sbjct: 182 VPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVC 241

Query: 65  GICSHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGHAFEILGHETMS 124
           GIC   H  +    VE G  I +PERA  IR I+ E+ERLHSH L  G A   +G ++  
Sbjct: 242 GICGFAHSTAYTTSVENGMGIVVPERAQMIRAILLEVERLHSHLLNLGLACHFVGFDSGF 301

Query: 125 MRCFMLREPIMQVFFEISGSRVHYSCPIIGGIRPRCNISETQIPHILDKISKYEEGLNKF 184
           M+ F +RE  M++   ++G+R  Y   +IGGIR   ++ +  +        +    + + 
Sbjct: 302 MQFFRVREASMKMAEILTGARKTYGLNLIGGIRR--DLLKDDMIQTRQLAQQMRRDVQEL 359

Query: 185 LERMLNDPMIISRVKDVGVMDRKTAAKFHAVGPTARGSNVKSDMRKWGWVPEYDPYDFDE 244
           ++ +L+ P I  R   +G +D + A  F  VGP  R S    D R       Y       
Sbjct: 360 VDMLLSTPNIEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMTV 419

Query: 245 ILFDSGDVFARLAVRFYECLESVKIIRQALDALKD---TSDKRIYNPNYELHEFKPINCY 301
                 DV +RL VR  E   ++ +I   LD L       +   Y PN     F      
Sbjct: 420 HSEQGCDVISRLKVRMNEVFTALNMIDYGLDNLPGGPLMVEGFTYIPNRFALGF------ 473

Query: 302 TEAQRGEQYYSYGLDDEGLVRQAKIRTPTATNLGAMEDIVKGYHVSDAELIIASCDPCFT 361
            EA RG+  +     D   + + + R  T  N   +  +++G  VSDA LII S DPC++
Sbjct: 474 AEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYS 533

Query: 362 CTDRLMVLKEPFKK 375
           CTDR+ V+    KK
Sbjct: 534 CTDRMTVVDVRKKK 547