Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 569 a.a., formate hydrogenlyase subunit HycE from Escherichia coli ECRC62

 Score =  164 bits (415), Expect = 6e-45
 Identities = 118/378 (31%), Positives = 185/378 (48%), Gaps = 20/378 (5%)

Query: 6   IAIGPVHSTMLEPHRLRLFIEDEIVKDAELTIGVNHRGVERLMEG-LPVEKACILCEKIC 64
           + IGP+H T  EP   RLF++ E + DA+  +   HRG+E+L E  +   +   L +++C
Sbjct: 182 VPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVC 241

Query: 65  GICSHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGHAFEILGHETMS 124
           GIC   H  +    VE    I++PERA  IR I+ E+ERLHSH L  G A    G ++  
Sbjct: 242 GICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGF 301

Query: 125 MRCFMLREPIMQVFFEISGSRVHYSCPIIGGIRPRCNISETQIPHILDKISKYEEGLNKF 184
           M+ F +RE  M++   ++G+R  Y   +IGGIR   ++ +  +        +    + + 
Sbjct: 302 MQFFRVRETSMKMAEILTGARKTYGLNLIGGIRR--DLLKDDMIQTRQLAQQMRREVQEL 359

Query: 185 LERMLNDPMIISRVKDVGVMDRKTAAKFHAVGPTARGSNVKSDMRK------WGWVPEYD 238
           ++ +L+ P +  R   +G +D + A  F  VGP  R S    D R       +G +P   
Sbjct: 360 VDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPM-- 417

Query: 239 PYDFDEILFDSG-DVFARLAVRFYECLESVKIIRQALDALKDTSDKRIYNPNYELHEFKP 297
                E+  + G DV +RL VR  E   ++ +I   LD L       +    Y  H F  
Sbjct: 418 -----EVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPG-GPLMVEGFTYIPHRF-- 469

Query: 298 INCYTEAQRGEQYYSYGLDDEGLVRQAKIRTPTATNLGAMEDIVKGYHVSDAELIIASCD 357
              + EA RG+  +     D   + + + R  T  N   +  +++G  VSDA LII S D
Sbjct: 470 ALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLD 529

Query: 358 PCFTCTDRLMVLKEPFKK 375
           PC++CTDR+ V+    KK
Sbjct: 530 PCYSCTDRMTVVDVRKKK 547