Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 599 a.a., NADH-quinone oxidoreductase subunit C/D from Dickeya dianthicola ME23

 Score = 88.6 bits (218), Expect = 4e-22
 Identities = 85/383 (22%), Positives = 163/383 (42%), Gaps = 27/383 (7%)

Query: 8   IGPVHSTMLEPHRLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKICGIC 67
           +GP H +     R+ L +  E + D    IG +HRG E++ E           ++I  + 
Sbjct: 219 LGPNHPSAHGAFRIILQLNGEEIVDCIPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 278

Query: 68  SHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGHAFEILGHETMSMRC 127
             ++       VE    IE+PER   IR+++ EL R++SH L      + +G  T     
Sbjct: 279 GCVNEMPYVLAVEKLAGIEVPERVKVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 338

Query: 128 FMLREPIMQVFFEISGSRVHYSCPIIGGIRPRCNISETQIPHILDKISKYEEGLNKFLER 187
           F  R+ I  +   I+G R+H +   IGG+         ++  + + +      L+ +++ 
Sbjct: 339 FTDRQKIYDLVEAITGYRMHPAWFRIGGVAHDLPRGWERL--LREFLEWMPARLDTYVKA 396

Query: 188 MLNDPMIISRVKDVGVMDRKTAAKFHAVGPTARGSNVKSDMRKWGWVPEYDPYDFDEILF 247
            L + ++  R + V   + K A ++   G   R + +  D+RK      Y+ +DF+  + 
Sbjct: 397 ALQNSILKGRSQGVAAYNAKDALEWGVTGAGLRATGIAFDVRKSRPYSGYENFDFEIPVG 456

Query: 248 DS-GDVFARLAVRFYECLESVKIIRQALDALKD---TSDKRIYNPNYELHEFKPINC--- 300
           D   D ++R+ ++  E  +S++I+ Q L  + +    +D  +  P  +    + I     
Sbjct: 457 DGVSDCYSRVMLKVEELRQSLRILEQCLKNMPEGPFKADHPLTTPPPKERTLQHIETLIN 516

Query: 301 ------------------YTEAQRGEQYYSYGLDDEGLVRQAKIRTPTATNLGAMEDIVK 342
                               EA +G   Y    D   +  + +IRTP+  +L  +  +++
Sbjct: 517 HFLQVSWGPVMPANESFQMVEATKGVNSYYLTSDGSTMSYRTRIRTPSFPHLQQIPAVIR 576

Query: 343 GYHVSDAELIIASCDPCFTCTDR 365
           G  VSD  + + S D   +  DR
Sbjct: 577 GCLVSDLIVYLGSIDFVMSDVDR 599