Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 595 a.a., NADH-quinone oxidoreductase subunit C/D from Acinetobacter radioresistens SK82

 Score =  123 bits (308), Expect = 2e-32
 Identities = 105/387 (27%), Positives = 173/387 (44%), Gaps = 36/387 (9%)

Query: 8   IGPVHSTMLEPHRLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKI--CG 65
           +GP H +     R+ L ++ E +KD    IG +HRG E++ E           +++   G
Sbjct: 216 LGPNHPSAHGAFRVILQLDGEEIKDCVPDIGYHHRGAEKMGERQTWHSYIPYTDRVDYLG 275

Query: 66  ICSHI--HLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGHAFEILGHETM 123
            CS    +L S  +L      I +P+RA  IR+++ EL R+++H L  G A +  G  T 
Sbjct: 276 GCSQNMPYLMSIEQLA----GITVPDRAQCIRVMMSELFRINNHLLYIGTAIQDAGGMTP 331

Query: 124 SMRCFMLREPIMQVFFEISGSRVHYSCPIIGGIRPRC-NISETQIPHILDKISKYEEGLN 182
               F  R+ I      I+G R+H +   IGG      N  +  I  IL+ + K    +N
Sbjct: 332 VFYMFADRQKIYDAIEAITGFRMHPAWFRIGGTAHDLPNNWQKLIREILEWMPKR---MN 388

Query: 183 KFLERMLNDPMIISRVKDVGVMDRKTAAKFHAVGPTARGSNVKSDMRKWGWVPEYDPYDF 242
           ++    L + + + R K+V   D K A  +   G   R + +  D+RK+     Y+ YDF
Sbjct: 389 EYYTAALRNSVFMGRTKNVAQYDAKAALAWGVTGTGLRATGIDFDVRKYRPYSGYENYDF 448

Query: 243 DEILFDSGDVFARLAVRFYECLESVKIIRQALD-------------ALKDTSDKRIYNPN 289
           +  +   GD +AR+ V F+E  E++KII+Q LD             A+    DK + +  
Sbjct: 449 EVPVEYEGDAYARVMVHFHEINEALKIIKQCLDNMPSGAYKADHPLAVPPPKDKTLKDIE 508

Query: 290 YELHEFKPIN-----------CYTEAQRGEQYYSYGLDDEGLVRQAKIRTPTATNLGAME 338
             +  F  ++              E  +G   Y    D   +  + +IRTPT T+L  + 
Sbjct: 509 TLITHFLSVSWGPVMPAGESAVMAEVVKGASTYYLTSDKSTMSYRTRIRTPTFTHLQQIP 568

Query: 339 DIVKGYHVSDAELIIASCDPCFTCTDR 365
            ++ G  VSD  + +A+ D      DR
Sbjct: 569 SVINGSLVSDLIIYLATIDVVMADVDR 595