Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit from Methanococcus maripaludis S2

Subject, 472 a.a., isopropylmalate isomerase from Pseudomonas simiae WCS417

 Score =  214 bits (546), Expect = 3e-60
 Identities = 138/447 (30%), Positives = 230/447 (51%), Gaps = 54/447 (12%)

Query: 25  VMAKVETAMVHDITGPLSVNTLKKEGISKVWDNEKIVIPFDHQIPA---------DSINA 75
           V+  ++  ++++ T P + + L++ G   VW     +   DH  P          D+  A
Sbjct: 25  VLLYIDRQVINEYTSPQAFSGLREAG-RNVWRPGTALAVVDHVNPTTPKRIAAMPDAGGA 83

Query: 76  AENHILMRNFVKEQNIK--HFYDIREGVCHQVLPEKGHIVPGTVVVGADSHTCTYGAFGA 133
            +   L  N  ++  I+     D R+G+ H + PE+G I+PG V+   DSHT TYGA GA
Sbjct: 84  RQVSYLAEN-CRDFGIELLDILDKRQGIEHVIAPEQGFILPGMVIAAGDSHTTTYGALGA 142

Query: 134 FATGIGSTDMAAAFATGELWFKVPETLYFNITGELKPEVMSKDVILSIIGMVGADGATYK 193
           F  GIG++++    A+  L +K  +T+  ++ G+L P + SKDVI+++IG +GA GAT  
Sbjct: 143 FGFGIGTSEIEHLLASQTLVYKRLKTMCVSVDGDLAPGLTSKDVIMALIGKIGASGATGY 202

Query: 194 AAQFAGNTVDNMTIASRMTMSNMAIEMGGKAGLIAPDDKTINYVKNAMEA------NNTA 247
           A +F G+T+D +++ +RMT+ NMA+E G +   +APD+K   Y+K    A      +   
Sbjct: 203 AIEFRGSTLDALSVEARMTICNMAVEAGARGAFMAPDEKVFAYLKGKPRAPQGELWDQAL 262

Query: 248 KPFELVLGDKNAEFEEKFEIDVSNLEPVMAC----------------PHNVDN------- 284
             + L+  D  A F+++ ++D + LEP++                  P +V +       
Sbjct: 263 AGWRLLHSDVGAVFDQEVQLDATTLEPMVTWGTSPDQAAPIGARVPDPQDVSDLILRQDM 322

Query: 285 --------VKAVREVAGTPIDQVFIGSCTNGRLEDLRAALNVIE-KHGGISKDIRVVVTP 335
                   ++A   ++   I   FIGSCTN R+EDLR A +V+  KH  +++ +R ++ P
Sbjct: 323 RRALNYMGLEAGMRLSDIVISHAFIGSCTNARIEDLRDAASVVRGKH--VAEHVRAMIVP 380

Query: 336 ASRSIMLEAIDEGLIKKFYQYGCVVTNPSCSACMGALYGLLGPGEVGIATSNRNFRGREG 395
            S  +  +A  EGL   F   G       CS C+     +L PG+   +++NRNF GR+G
Sbjct: 381 GSTEVRDQAEAEGLAAIFIDAGFEWRQSGCSMCLAMNDDVLAPGDRCASSTNRNFEGRQG 440

Query: 396 SLESDVYLASPITAAACAVKGEIVDPR 422
           +  +  +L SP   AA A+ G + D R
Sbjct: 441 A-GARTHLMSPAMVAAAAITGRLTDIR 466