Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit from Methanococcus maripaludis S2

Subject, 668 a.a., 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) from Variovorax sp. SCN45

 Score =  159 bits (403), Expect = 2e-43
 Identities = 103/333 (30%), Positives = 171/333 (51%), Gaps = 23/333 (6%)

Query: 100 GVCHQVLPEKGHIVPGTVVVGADSHTCTYGAFGAFATGIGSTDMAAAFATGELWFKVPET 159
           G+ H ++ E  + +PG +VVG DSHT   GA G  A G+G+TDMA AF TG +   VP +
Sbjct: 326 GISHAMMTEH-YALPGQLVVGTDSHTPHSGALGCVAFGVGTTDMANAFVTGAVRMTVPPS 384

Query: 160 LYFNITGELKPEVMSKDVILSIIG--MVGADGATYKAAQFAGNTVDNMTIASRMTMSNMA 217
           L   + G L P V +KD+ L+++    + A     K  +F G  V+ ++   R T++NM 
Sbjct: 385 LRIVLDGALPPGVTAKDIALNLLARPAIRAGSGVGKVFEFTGPVVEKLSTDERATLTNMT 444

Query: 218 IEMGGKAGLIAPDDKTINYVKNAMEANNTAKPFELVLGDKNAEFEEKFEIDVSNLEPVMA 277
            E+GG  G++APD +T+ +++         +  + +  D +A + E   +D S +  ++A
Sbjct: 445 AELGGFTGIVAPDAETVRFLRERRGVEFVLE--DWMRSDPDAVYAETIHLDCSTVGAMVA 502

Query: 278 CPHNVDNVKAVREV-AGTPIDQVFIGSCTNGRLEDLRAALNVI----EKHGGISKDIRVV 332
            P +  N   + +V     ID  + GSCT G+ ED      V+    ++   ++  + + 
Sbjct: 503 SPGDPGNGLPLSQVKESVRIDIAYGGSCTAGKREDFDHYHEVLRWAADRGMRVAPGVELF 562

Query: 333 VTPASRSIMLEAIDEGLIKKFYQYGCVVTNPSCSACMGALYGLLGPG------EVGIATS 386
           +   + ++  + +  G +  F + G  +  PSC AC     G  GPG      +V ++  
Sbjct: 563 LQFGTTAVRDQCVAAGYLDAFERVGARILQPSCGAC-----GNCGPGGSARAEQVTVSAI 617

Query: 387 NRNFRGREGSLESDVYLASPITAAACAVKGEIV 419
           NRNF GR G     V+LASP T AA A+ GE++
Sbjct: 618 NRNFPGRGG--PGSVWLASPPTVAASAIAGELL 648