Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit from Methanococcus maripaludis S2

Subject, 861 a.a., Aconitate hydratase 2 (EC 4.2.1.3) from Variovorax sp. SCN45

 Score =  112 bits (279), Expect = 6e-29
 Identities = 120/457 (26%), Positives = 199/457 (43%), Gaps = 59/457 (12%)

Query: 4   TLAEKILAKASGNSE---VSPGDIVMAKVETAMVHDITGPLSVNTLKKEGISKVWDNEKI 60
           +LA+K++ +A G  E   V PG     K+ +    D TGP++ + LK       +  + +
Sbjct: 381 SLAQKMVGRACGLPEGQGVRPGTYCEPKMTSVGSQDTTGPMTRDELKDLACLG-FSADLV 439

Query: 61  VIPFDHQIPADSINAAENHILMRNFVKEQNIKHFYDIREGVCHQVLPEKGHIVPGTVVVG 120
           +  F H          + H  +  F+  +         +GV H  L     + P TV  G
Sbjct: 440 MQSFCHTAAYPKKVDVKMHHELPEFMANRGGVSLRP-GDGVIHSWLNRL--LTPDTVGTG 496

Query: 121 ADSHTCTYGAFGAFATGI----GSTDMAAAFATGELWFKVPETLYFNITGELKPEVMSKD 176
            DSHT        F  GI    GS  +A A ATG +   +PE++     G+++P V  +D
Sbjct: 497 GDSHT-------RFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGVTLRD 549

Query: 177 VILSIIGMVGADGATYKAAQ-----FAGNTVD-----NMTIASRMTMSNMAIEMGGKAGL 226
           ++ +I       G    A Q     F+G  ++      + +     +S+ + E       
Sbjct: 550 LVNAIPLYAIKSGLLTVAKQGKKNIFSGRILEIEGLPELKVEQAFELSDASAERSAAGCT 609

Query: 227 IAPD-DKTINYVKN-----------------------AMEANNTAKPFELVLGDKNAEFE 262
           +  + +  I Y+ +                       A +    A P +L+ GD +A++ 
Sbjct: 610 VHLNKEPIIEYINSNITLMKWMIAEGYADARTLQRRIAAQEAWLANP-QLLKGDDDADYA 668

Query: 263 EKFEIDVSNL-EPVMACPHNVDNVKAVREVAGTPIDQVFIGSCTNGRLEDLRAALNVIEK 321
              EID++ + EP++ACP++ D+VK + +VAG  ID+VFIGSC    +   RAA  ++E 
Sbjct: 669 AVIEIDLAEIHEPIVACPNDPDDVKTLSDVAGAAIDEVFIGSCMT-NIGHFRAASKLLE- 726

Query: 322 HGGISKDIRVVVTPASRSIMLEAIDEGLIKKFYQYGCVVTNPSCSACMGALYGLLGPGEV 381
            G     +++ + P ++    +  +EG    F   G     P CS CMG     +  G  
Sbjct: 727 -GKRDIPVKLWIAPPTKMDAQQLTEEGHYGVFGNAGARTEMPGCSLCMGN-QAQVREGAT 784

Query: 382 GIATSNRNFRGREGSLESDVYLASPITAAACAVKGEI 418
            ++TS RNF  R G   ++VYL S   AA C+  G I
Sbjct: 785 VMSTSTRNFPNRLGK-NTNVYLGSAELAAICSRLGRI 820