Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit from Methanococcus maripaludis S2

Subject, 466 a.a., 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) from Variovorax sp. SCN45

 Score =  192 bits (487), Expect = 2e-53
 Identities = 144/471 (30%), Positives = 224/471 (47%), Gaps = 53/471 (11%)

Query: 1   MAMTLAEKILAKASGNSEVSPGDIVMAKVETAMVHDITGPLSVNTLKKEGISKVWDNEKI 60
           MA TL +K L  A    E+  G  ++  V+  ++HD++GP ++  +   G+  + D   +
Sbjct: 1   MARTLFDK-LWDAHVVRELGDGWALL-HVDRHLLHDLSGPPALAEVAARGLP-LHDPALV 57

Query: 61  VIPFDH-------QIPADSINAAENHILMRNFVKEQNIKHFYDIRE---GVCHQVLPEKG 110
               DH       + P         H  +     +  ++ FYD+ +   G+ H + PE G
Sbjct: 58  FATPDHAASSLPGRTPGTFPLGGRLHGALAKLSADAGVR-FYDLGQPGQGIVHVMGPELG 116

Query: 111 HIVPGTVVVGADSHTCTYGAFGAFATGIGSTDMAAAFATGELWFKVPETLYFNITGELKP 170
            ++PG  V+  DSHTCT G  GA A G+GS++   A AT  L  + P+ +     G L  
Sbjct: 117 IVLPGLTVICGDSHTCTNGGLGALAFGVGSSESTHALATQTLRQQKPKRMRIRCDGALGA 176

Query: 171 EVMSKDVILSIIGMVGADGATYKAAQFAGNTVDNMTIASRMTMSNMAIEMGGKAGLIAPD 230
            V +KD+ L IIG +GA      A +FAG  V  + + +R+T+ N+ +E+G + GLIAPD
Sbjct: 177 GVTAKDLALHIIGKLGAAAGVGYAIEFAGEAVRALDVEARLTLCNLTVELGARFGLIAPD 236

Query: 231 DKTINYVKNAMEA------NNTAKPFELVLGDKNAEFEEKFEIDVSNLEPVMACPHNVDN 284
            +T+ +V+    A      +  A  + L+  D++A F+ +  I+   + P +    + ++
Sbjct: 237 RRTVEWVRGRNFAPTGEAFDAAAAHWLLLASDEDAVFDREETINAGTIAPTITWGTSPED 296

Query: 285 VKAV-------------------------------REVAGTPIDQVFIGSCTNGRLEDLR 313
             A+                                 +AGTP+D VFIGSC N RL DLR
Sbjct: 297 AIAIDGTVPDPSTAADDATRGAIEAALDYMGLAPRTAIAGTPVDWVFIGSCANSRLPDLR 356

Query: 314 AALNVIEKHGGISKDIRVVVTPASRSIMLEAIDEGLIKKFYQYGCVVTNPSCSACMGALY 373
           AA   + +   ++  +   V P S ++   A  EGL   F   G     P CS C+ A  
Sbjct: 357 AAA-AVARGRHVAHGVTAWVVPGSENVRRAAEAEGLRDVFEAAGFQWREPGCSMCVAANG 415

Query: 374 GLLGPGEVGIATSNRNFRGREGSLESDVYLASPITAAACAVKGEIVDPRDL 424
             + P    ++TSNRNF GR+G   +  +LASP  AAA AV G I D R L
Sbjct: 416 EQVPPQARCVSTSNRNFVGRQGP-GARTHLASPAMAAAAAVTGRITDVRTL 465