Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit from Methanococcus maripaludis S2

Subject, 424 a.a., 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) from Variovorax sp. SCN45

 Score =  310 bits (795), Expect = 4e-89
 Identities = 168/424 (39%), Positives = 256/424 (60%), Gaps = 13/424 (3%)

Query: 4   TLAEKILAKASGNSEVSPGDIVMAKVETAMVHDITGPLSVNTLKKEGISKVWDNEKIVIP 63
           TLA+K++A+ASG   V+ G+IV   V+ AM HD +GP  +  + +E  +++WD  +IV+ 
Sbjct: 9   TLAQKLIARASGRDHVAVGEIVTCDVDLAMFHDSSGPRRLKPMLEELGAQIWDRSRIVLV 68

Query: 64  FDHQIPADSINAAENHILMRNFVKEQNIKHFYDIREGVCHQVLPEKGHIVPGTVVVGADS 123
            DH +P    ++     + R++ ++Q + H YD  +G+CH V+P+ GHI PG + VG DS
Sbjct: 69  MDHYVPERDDDSRRIVRIARDWARDQQLPHVYD-SQGICHVVVPQHGHIRPGMLCVGGDS 127

Query: 124 HTCTYGAFGAFATGIGSTDMAAAFATGELWFKVPETLYFNITGELKPEVMSKDVILSIIG 183
           H+ T GAFGA+  G+GST+M     TG++W +VPETL     G+L   V +KD++L +IG
Sbjct: 128 HSPTGGAFGAYMFGVGSTEMLGVLVTGQIWLRVPETLQMWWDGKLSAGVTAKDMMLHMIG 187

Query: 184 MVGADGATYKAAQFAGNTVDNMTIASRMTMSNMAIEMGGKAGLIAPDDKTINYVKNAMEA 243
             G +G  Y+A +FAG  V  +++  RMT+SNM+ E+G +AGLIAPD  T  ++  A   
Sbjct: 188 RFGMNGGRYQAVEFAGPAVMALSMQERMTLSNMSAELGAQAGLIAPDATTAAFLAQA--- 244

Query: 244 NNTAKPFELV--LGDKNAEFEEKFEIDVSNLEPVMACPHNVDNVKAVREVAGTPIDQVFI 301
              A P ++     D+ A+   +   D S LEP +A PH+  N   V   A TP+D  +I
Sbjct: 245 --GAPPVDMTPWFTDEGADL-TRHRFDASALEPHIAAPHSPANSHGVSRYADTPVDVAYI 301

Query: 302 GSCTNGRLEDLRAALNVIEKHGGISKDIRVVVTPASRSIMLEAIDEGLIKKFYQYGCVVT 361
           G+CT  +L+DLRAA  V+  H  ++  IR++V PAS     +A +EG+++     G  + 
Sbjct: 302 GACTGAKLDDLRAAAQVLRGH-KVAAGIRLIVAPASIQDQEQAREEGVLQVLMDAGAELF 360

Query: 362 NPSCSACMGALYG-LLGPGEVGIATSNRNFRGREGSLESDVYLASPITAAACAVKGEIVD 420
             +C AC G  YG  +G     I+T+ RNF+GR GS  + VYL SP T AA A++G + D
Sbjct: 361 PTACGACSG--YGDPMGDDVTVISTTARNFKGRMGSPTAQVYLGSPYTVAAAALRGRVTD 418

Query: 421 PRDL 424
           PR++
Sbjct: 419 PREV 422