Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit from Methanococcus maripaludis S2

Subject, 466 a.a., 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  222 bits (565), Expect = 2e-62
 Identities = 154/473 (32%), Positives = 231/473 (48%), Gaps = 57/473 (12%)

Query: 1   MAMTLAEKILAKASGNSEV---SPGDIVMAKVETAMVHDITGPLSVNTLKKEGISKVWDN 57
           MA TL EK+      ++ V   +P +  +  ++  +VH++T P + + L+      V   
Sbjct: 1   MAKTLYEKLF-----DAHVVFEAPNETPLLYIDRHLVHEVTSPQAFDGLRAHH-RPVRQP 54

Query: 58  EKIVIPFDHQIPADS--INAAEN--HILMRNFVKEQNI--KHFYDIR---EGVCHQVLPE 108
            K     DH +   +  INA+     I M+  +K  N      YD+    +G+ H + PE
Sbjct: 55  GKTFATMDHNVSTQTKDINASGEMARIQMQELIKNCNEFGVELYDLNHPYQGIVHVMGPE 114

Query: 109 KGHIVPGTVVVGADSHTCTYGAFGAFATGIGSTDMAAAFATGELWFKVPETLYFNITGEL 168
           +G  +PG  +V  DSHT T+GAFGA A GIG++++    AT  L     +T+   +TG  
Sbjct: 115 QGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQGRAKTMKIEVTGNA 174

Query: 169 KPEVMSKDVILSIIGMVGADGATYKAAQFAGNTVDNMTIASRMTMSNMAIEMGGKAGLIA 228
            P + +KD++L+IIG  G+ G T    +F G+ +  +++  RMT+ NMAIEMG KAGL+A
Sbjct: 175 APGITAKDIVLAIIGKTGSAGGTGHVVEFCGDAIRALSMEGRMTLCNMAIEMGAKAGLVA 234

Query: 229 PDDKTINYVKNAMEA------NNTAKPFELVLGDKNAEFEEKFEIDVSNLEPVMACPHNV 282
           PD+ T NYVK  + A      +   + ++ +  D  A F+    +    + P +    N 
Sbjct: 235 PDETTFNYVKGRLHAPKGRDFDEAVEYWKTLKTDDGATFDTVVALRAEEIAPQVTWGTNP 294

Query: 283 DNVKAVREVAGTP-------------------------------IDQVFIGSCTNGRLED 311
             V +V ++   P                               ID+VFIGSCTN R+ED
Sbjct: 295 GQVISVTDIIPDPASFSDPVERASAEKALAYMGLQPGVPLTDVAIDKVFIGSCTNSRIED 354

Query: 312 LRAALNVIEKHGGISKDIRVVVTPASRSIMLEAIDEGLIKKFYQYGCVVTNPSCSACMGA 371
           LRAA  V  K   ++  ++ +V P S  +  +A  EGL K F + G     P CS C+  
Sbjct: 355 LRAAAEV-AKGRKVAPGVQALVVPGSGPVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAM 413

Query: 372 LYGLLGPGEVGIATSNRNFRGREGSLESDVYLASPITAAACAVKGEIVDPRDL 424
               L PGE   +TSNRNF GR+G      +L SP  AAA AV G   D R +
Sbjct: 414 NNDRLNPGERCASTSNRNFEGRQGR-GGRTHLVSPAMAAAAAVTGHFADIRSI 465