Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit from Methanococcus maripaludis S2

Subject, 469 a.a., 3-isopropylmalate dehydratase, large subunit from Agrobacterium fabrum C58

 Score =  231 bits (590), Expect = 3e-65
 Identities = 147/451 (32%), Positives = 231/451 (51%), Gaps = 52/451 (11%)

Query: 21  PGDIVMAKVETAMVHDITGPLSVNTLKKEGISKVWDNEKIVIPFDHQIP--ADSINAAEN 78
           P    +  ++  +VH++T P +   L+  G   V    + +   DH +P  AD +   +N
Sbjct: 21  PDGTCLLYIDRHLVHEVTSPQAFEGLRIAG-RPVHSPTRTLAVVDHNVPTTADRLEGIKN 79

Query: 79  H-------ILMRNFVKEQNIKHFY--DIREGVCHQVLPEKGHIVPGTVVVGADSHTCTYG 129
                    L +N  KE  ++++   D R+G+ H V PE+G  +PG  +V  DSHT T+G
Sbjct: 80  EESRIQVEALAQN-AKEFGVEYYSERDKRQGIVHIVGPEQGFTLPGMTIVCGDSHTSTHG 138

Query: 130 AFGAFATGIGSTDMAAAFATGELWFKVPETLYFNITGELKPEVMSKDVILSIIGMVGADG 189
           AFGA A GIG++++    AT  L  K  + +   + G+L   V +KD+IL+IIG +G  G
Sbjct: 139 AFGALAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGKLPESVTAKDIILAIIGEIGTAG 198

Query: 190 ATYKAAQFAGNTVDNMTIASRMTMSNMAIEMGGKAGLIAPDDKTINYVKNAMEA------ 243
            T    +FAG  + ++++  RMT+ NM IE G +AGLIAPD+ T +Y+K+   A      
Sbjct: 199 GTGHVIEFAGEAIRSLSMEGRMTVCNMTIEGGARAGLIAPDETTFDYIKDKPRAPKGETL 258

Query: 244 NNTAKPFELVLGDKNAEFEEKFEIDVSNLEPVMACPHNVDNVKAVREVAGTP-------- 295
                 ++ +  D+ A +++   +D +NL P+++   + ++V +V  +   P        
Sbjct: 259 EQAIAYWKTLKSDEGAHYDKVVILDAANLPPIVSWGSSPEDVTSVEGIVPNPDDIEEENK 318

Query: 296 -----------------------IDQVFIGSCTNGRLEDLRAALNVIEKHGGISKDIRVV 332
                                  ID+VFIGSCTNGR+EDLRAA  +++    ++  +  +
Sbjct: 319 RTSKWRALDYMGLKPGTRITDIAIDRVFIGSCTNGRIEDLRAAAKIVDGRK-VASTVSAM 377

Query: 333 VTPASRSIMLEAIDEGLIKKFYQYGCVVTNPSCSACMGALYGLLGPGEVGIATSNRNFRG 392
           + P S  +  +A  EGL K F   G     P CS C+      L PGE   +TSNRNF G
Sbjct: 378 IVPGSGLVKEQAEKEGLDKIFLDAGFEWREPGCSMCLAMNDDRLKPGERCASTSNRNFEG 437

Query: 393 REGSLESDVYLASPITAAACAVKGEIVDPRD 423
           R+G  +S  +L SP  AAA A+ G  VD R+
Sbjct: 438 RQG-YKSRTHLVSPAMAAAAAIAGHFVDVRE 467