Pairwise Alignments

Query, 122 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 54.3 bits (129), Expect = 2e-12
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 4/83 (4%)

Query: 15  SFAGCVDQNPEE---YYSKGILQYDDGNYTESIDLFEKAIQLNPEESKYWLMKGKALYNL 71
           S+   V+ NPE+   + + G LQY + NY ESI  FEK++ LN      W   G +   L
Sbjct: 318 SYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLL 377

Query: 72  ERYEEAVDCYNYVINVIEDEYNK 94
           + YE+A+ CY+  I  I+  YN+
Sbjct: 378 KNYEKALMCYDKAIE-IDPLYNE 399



 Score = 40.4 bits (93), Expect = 3e-08
 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 28  YSKGILQYDDGNYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCYNYVINV 87
           Y+KGI  Y    Y+ +I  FEKA+ LN      +  K  +L  L  YE+AV  Y   I +
Sbjct: 232 YNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIEL 291

Query: 88  IEDEYNKDVWA 98
             D  N   W+
Sbjct: 292 --DSKNPIFWS 300



 Score = 38.9 bits (89), Expect = 8e-08
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 22  QNPEEYYSKGILQYDDGNYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCY 81
           +NP  +   G+       Y  SI  +EKA++LNPE+   W   G   Y  + Y E++  +
Sbjct: 294 KNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYF 353

Query: 82  NYVINVIEDEYNKDVW 97
              +++  +  NK  W
Sbjct: 354 EKSLDL--NSNNKYAW 367



 Score = 35.4 bits (80), Expect = 8e-07
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 8/77 (10%)

Query: 31  GILQYDDGNYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 90
           G   Y +G Y ++I  F+KA+ L+         KG      E+Y  AV+C++    VI+D
Sbjct: 167 GYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKA--VIQD 224

Query: 91  E------YNKDVWAAKA 101
           E      YNK +   K+
Sbjct: 225 ECYYDAIYNKGISCYKS 241



 Score = 32.3 bits (72), Expect = 7e-06
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 11  LISISFAGCVDQNPEE---YYSKGILQYDDGNYTESIDLFEKAIQLNPEESKYWLMKGKA 67
           +  I F   ++  PE      S G +      Y +++  + K ++++    K W  KG  
Sbjct: 76  MAEIYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGIC 135

Query: 68  LYNLERYEEAVDCYN 82
           L  L  Y+E+V+ ++
Sbjct: 136 LKMLGNYDESVEAFD 150



 Score = 31.2 bits (69), Expect = 2e-05
 Identities = 16/61 (26%), Positives = 29/61 (47%)

Query: 27  YYSKGILQYDDGNYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCYNYVIN 86
           ++ KGI     GNY ES++ F+K+          W   G   Y    Y++A+ C++  + 
Sbjct: 129 WFYKGICLKMLGNYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALT 188

Query: 87  V 87
           +
Sbjct: 189 L 189



 Score = 30.0 bits (66), Expect = 4e-05
 Identities = 15/67 (22%), Positives = 31/67 (46%)

Query: 21  DQNPEEYYSKGILQYDDGNYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDC 80
           + NP  Y+ K       G Y +++  ++KAI+L+ +   +W   G +   L  Y  ++  
Sbjct: 259 NSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQS 318

Query: 81  YNYVINV 87
           Y   + +
Sbjct: 319 YEKAVEL 325



 Score = 25.8 bits (55), Expect = 7e-04
 Identities = 10/39 (25%), Positives = 22/39 (56%)

Query: 20 VDQNPEEYYSKGILQYDDGNYTESIDLFEKAIQLNPEES 58
          + ++   Y   G   Y + +Y  S+  F+KA++L+P+ +
Sbjct: 20 ITESSSTYAEMGEQCYLEKDYETSVKCFDKALELDPDNT 58



 Score = 23.5 bits (49), Expect = 0.003
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 47  FEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRH 106
           F + I+L PE        G+   + E Y++A+  YN ++ +  D      W  K   L+ 
Sbjct: 81  FGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEI--DNSVGKTWFYKGICLKM 138

Query: 107 IEGKEVEAE 115
           +   +   E
Sbjct: 139 LGNYDESVE 147