Pairwise Alignments

Query, 122 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 62.8 bits (151), Expect = 4e-15
 Identities = 27/83 (32%), Positives = 51/83 (61%), Gaps = 1/83 (1%)

Query: 1  LKKELILLGILISISFAGCV-DQNPEEYYSKGILQYDDGNYTESIDLFEKAIQLNPEESK 59
          ++K ++ L +++ +  AGC+ DQ  + Y  KG+  Y+ GNY +SI  +  A+  NP+ ++
Sbjct: 1  MQKIVVFLTVILVLLMAGCIGDQKSKSYNDKGLELYNQGNYVDSISEYNLALLENPKSAE 60

Query: 60 YWLMKGKALYNLERYEEAVDCYN 82
           W+ KG +L  L  Y E+ +C++
Sbjct: 61 IWVNKGNSLLKLGIYGESTECFD 83



 Score = 61.6 bits (148), Expect = 9e-15
 Identities = 26/81 (32%), Positives = 50/81 (61%), Gaps = 2/81 (2%)

Query: 22  QNPEEYYSKGILQYDDGNYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCY 81
           +N E +   G +    GNY +++++++K++ ++ E S+ W  KG  L N++RY EA+DC+
Sbjct: 91  ENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCF 150

Query: 82  NYVINVIEDEYNKDVWAAKAD 102
           +  I++  +  N DVW  K +
Sbjct: 151 DKSISI--NAKNSDVWYNKGE 169



 Score = 54.3 bits (129), Expect = 1e-12
 Identities = 24/68 (35%), Positives = 41/68 (60%)

Query: 22  QNPEEYYSKGILQYDDGNYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCY 81
           +N E + +KGI   +   Y+E+ID F+K+I +N + S  W  KG+  + L  YE+++D Y
Sbjct: 125 ENSEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSY 184

Query: 82  NYVINVIE 89
           N  + + E
Sbjct: 185 NKALLIDE 192



 Score = 50.1 bits (118), Expect = 3e-11
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 4/91 (4%)

Query: 22  QNPEEYYSKGILQYDDGNYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCY 81
           +N + +Y+KG  Q+  G Y +SID + KA+ ++ +     L KG +   L+ YE A++C+
Sbjct: 159 KNSDVWYNKGETQFKLGEYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECF 218

Query: 82  NYVINV-IEDEYNKDVWAAKADALRHIEGKE 111
           N    +  + EY       KADA R  E  E
Sbjct: 219 NTAETINPKSEYPP---YYKADAYRDTENFE 246



 Score = 49.7 bits (117), Expect = 4e-11
 Identities = 22/65 (33%), Positives = 37/65 (56%)

Query: 23  NPEEYYSKGILQYDDGNYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCYN 82
           N +   SKGI      NY+ +I  F+ AIQL+P+  + W++KG +   L+ YE ++ CY 
Sbjct: 262 NSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKDYESSISCYK 321

Query: 83  YVINV 87
             + +
Sbjct: 322 KALEI 326



 Score = 30.0 bits (66), Expect = 3e-05
 Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 53  LNPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADAL 104
           +  ++SK +  KG  LYN   Y +++  YN  + ++E+  + ++W  K ++L
Sbjct: 20  IGDQKSKSYNDKGLELYNQGNYVDSISEYN--LALLENPKSAEIWVNKGNSL 69



 Score = 28.1 bits (61), Expect = 1e-04
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 39  NYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWA 98
           NY  +I+ F  A  +NP+       K  A  + E +E A+  Y+  + +  +  N D+  
Sbjct: 210 NYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEYALKYYDEALEI--NPSNSDILI 267

Query: 99  AKADAL 104
           +K   L
Sbjct: 268 SKGICL 273