Pairwise Alignments

Query, 122 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 798 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 16/65 (24%), Positives = 37/65 (56%)

Query: 27  YYSKGILQYDDGNYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCYNYVIN 86
           + + G++    G   +++  +++ ++L+P     WL +GKALY   R E+A+D +   + 
Sbjct: 277 HMNSGVIFKKLGQPDQAVASYDRVLELDPANGPAWLNRGKALYEAGRVEDALDSFRSALR 336

Query: 87  VIEDE 91
           ++ D+
Sbjct: 337 LMPDD 341



 Score = 35.0 bits (79), Expect = 2e-06
 Identities = 18/53 (33%), Positives = 29/53 (54%)

Query: 38  GNYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 90
           G   E+ + F +A++L+P    +    G+AL +L R E+A + Y  VI V  D
Sbjct: 220 GRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVAPD 272



 Score = 30.0 bits (66), Expect = 7e-05
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 38  GNYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCY 81
           G + +++  + +A+ L P  ++     G AL  L R EEA +C+
Sbjct: 186 GRWADAVGAWGRALALEPNHAEVRADMGVALAKLGRQEEAAECF 229



 Score = 28.9 bits (63), Expect = 2e-04
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 2/92 (2%)

Query: 22  QNPEEYYSKGILQYDDGNYTESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCY 81
           Q+ E   + G+     G   E+ID F KA +L P  +K     G AL+   R+ +AV  +
Sbjct: 136 QDVEARCNLGLACRAAGRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWADAVGAW 195

Query: 82  NYVINVIED--EYNKDVWAAKADALRHIEGKE 111
              + +  +  E   D+  A A   R  E  E
Sbjct: 196 GRALALEPNHAEVRADMGVALAKLGRQEEAAE 227



 Score = 26.6 bits (57), Expect = 7e-04
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 22 QNPEEYYSKGILQYDDGNYTESIDLFEKAIQLNPEESK 59
          ++ E  Y+ G+L    G   +S+D   +A +L PE+ +
Sbjct: 34 EHVEALYAYGVLLAQTGRLPQSLDHLSRAARLAPEDGR 71