Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 826 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

 Score =  249 bits (636), Expect = 5e-70
 Identities = 219/825 (26%), Positives = 394/825 (47%), Gaps = 70/825 (8%)

Query: 29  GRNTLICSPTGSGKTLSSFIAIINELFRIE------KEEGLQNSIYCLYISPLKSLANDI 82
           G++ L+ + TG+GKT + + A +N  F I       K +     +  L+I+P+++LA D 
Sbjct: 33  GQSGLLHASTGAGKTYALWFAALNR-FAIARPPVTAKRKPPAEPLTVLWITPMRALAADT 91

Query: 83  HVNLDEPLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILNTTPETLAII 142
              L+ PL E  +I    G         +R GDTS+ E+++  ++ P +L TTPE+L ++
Sbjct: 92  ARALEAPL-EALQIPWSVG---------LRTGDTSSSERARQTRRQPTVLVTTPESLTLM 141

Query: 143 LNSPKFKEKLKTVQWVIIDEIHALADNKRGVHLSISLERLRELTNQEFLRIGCSATV--- 199
           L     +  L  ++ V++DE H L  NKRGV L ++L RLR   + + +  G SAT+   
Sbjct: 142 LARADSEVSLAHLRMVVVDEWHELIGNKRGVQLQLALARLRRW-HPDLMVWGISATLGNQ 200

Query: 200 -EPLEMVADYLGGYYDDGYKRPVEIVDTRFVRGYDLKLLCPVDDLINKTPKEISEKLYEK 258
              LE++     G    G      I+DT         LL PV +        I  K+  +
Sbjct: 201 AHALEVLVPQGDGINVQGQTAKQLIIDT---------LLPPVTERF-PWAGHIGLKMLPQ 250

Query: 259 LDRLIQTHENTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHGSLSKEKRLELEEKL 318
           +   +    + L+FTNTR  +E     L    P+         HHGSLS+E R  +E  L
Sbjct: 251 VVAEVDASSSCLVFTNTRAQSEIWFQALLDARPDWAGVI--ALHHGSLSRETRDWVERAL 308

Query: 319 KSGNLKFATTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAGHGIGKVAKGRIIAL 378
           K G LK    +SSL+LG+D   ++ V+QIGS K V  ++QR GR+GH  G+ ++  ++  
Sbjct: 309 KDGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRPSRVTLVPT 368

Query: 379 DRDELLECAVMLKKAMDGFIDKVHIPKGPLDVLIQHIYGIAINGYIELERVKNIVRRSYN 438
              EL+E A          I+    P  PLDVL+QH+  +A+ G  + + +   VR ++ 
Sbjct: 369 HSLELVEAAAAQDAIAQRRIEARESPYKPLDVLVQHLVSMALGGGYKPDDLLVEVRGAWA 428

Query: 439 YHDITDEDFKILINYMTASYAGMDEKRIYSKIWYDPDTQMIGKT--GKTARAIYYMNIGT 496
           YHD+TDED+   + ++      +     Y ++  +PD   I +    + AR  + M++GT
Sbjct: 429 YHDLTDEDWAWALGFVRHGGLSLTAYPDYRRV--EPDEHGIWRVPDARLARR-HRMSVGT 485

Query: 497 IPDDFSCDVYLR-----GTTIWIGKLDEQYLDRLEKGDVFTLGGEHLKFQYRRGSKVYVD 551
           I  D S  ++L+     G    +G ++E ++ RL+ GD F   G  L+         YV 
Sbjct: 486 IVSDAS--IHLKFWSKGGGGKNLGSVEEGFIARLKPGDGFLFAGRLLELVRVENMTAYVR 543

Query: 552 KT-SERPNIPSWYSERLPLSYDLGRNILLFKKEAVSKYNAGRLLDLLSEYPLDSNATKSL 610
           ++ +++  +P W   R+PLS +L + ++                D  ++   +    +++
Sbjct: 544 RSNAKKAAVPRWNGGRMPLSNELAQAVV-------------ERFDAAAQGHFEGPEMQAV 590

Query: 611 YGLFNEQILYKGNDSVSTLNKMVVEGHIFDKKMHYYFHSNYGRKFNDGFSRAVAYALSKQ 670
             L   Q+ + G   + T   ++ E     +  H + +   GR+ + G +  +A+ +S+ 
Sbjct: 591 RPLLQTQVRWSG---LPTREHLLAEALKSREGWHLFLYPFAGRQVHLGLASLLAWRVSQG 647

Query: 671 YKLGVLVSISDTGFSLEFAK--NQKVDIESAIRSLTPENIKDVLKQALEGTNLLKRMFRI 728
             +   ++++D G  L  A   N    +  A+  L+PE++ + +  +L    L  R FR 
Sbjct: 648 QAVTFSIAVNDYGLELLSATEVNWPALLNEAL--LSPEHLLEDVVASLNAGELALRRFRE 705

Query: 729 NATRSLMILRNYIGHKKSAKKQQVSADILISYAKSLD-RFAPLEETLREIIEDSLELDNI 787
            A  + ++   Y G  KS ++ Q S+ +     K  D +   L +   E++ D L++  +
Sbjct: 706 IARIAGLVFAGYPGAPKSTRQVQASSGLFFEVFKQYDPQNLLLTQAGEEVLRDELDIRRL 765

Query: 788 REVLGEIRSGKLKINVIDVPIPTPMSFGIATLTASDSVLAENKNQ 832
            + L  + + KL+++ I    PTP++F +      +S+ +E  ++
Sbjct: 766 EQTLRHLCALKLELHRIQ--RPTPLAFPLLVERMRESMSSEKLSE 808