Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 489 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Variovorax sp. SCN45

 Score = 64.7 bits (156), Expect = 1e-14
 Identities = 77/353 (21%), Positives = 140/353 (39%), Gaps = 42/353 (11%)

Query: 16  TPPQRLAIPKIHFGRNTLICSPTGSGKTLSSFIAIINELFRIEKEEG--LQNSIYCLYIS 73
           TP Q  AIP +  G++ +  + TG+GKT +  + ++  + + E       ++ +  L + 
Sbjct: 27  TPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQRMLKHENASTSPARHPVRALVLL 86

Query: 74  PLKSLANDIHVNLDEPLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILN 133
           P + LA       D+   +IK   K      T +R  +  G      ++  LKK   +L 
Sbjct: 87  PTRELA-------DQVAQQIKLYAK-----YTNLRSTVVFGGIDMKPQTLELKKGVEVLV 134

Query: 134 TTPETLAIILNSPKFKEKLKTVQWVIIDEIHALADNKRGVHLSISLERLRELTNQEFLRI 193
            TP  L   + +      L  V++V++DE    AD    +     L+R+     ++   +
Sbjct: 135 ATPGRLLDHIEAKN--AVLNQVEYVVLDE----ADRMLDIGFLPDLQRILSYLPKQRTTL 188

Query: 194 GCSATVEP--LEMVADYLGGYYDDGYKRPVEIVDTRFVRGYDLKLLCPVDDLINKTPKEI 251
             SAT  P    + + YL         RP E   T     Y +      DD   +  K+I
Sbjct: 189 LFSATFSPEIKRLASSYLQNPITIEVARPNETASTVEQHFYSVS-----DDDKRRALKQI 243

Query: 252 SEKLYEKLDRLIQTHENTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHGSLSKEKR 311
             +         +      +F N++ G  R+  +L +      D   +   HG  S+++R
Sbjct: 244 VRQ---------RGITQAFVFVNSKLGCARLARSLER------DGLRTTALHGDKSQDER 288

Query: 312 LELEEKLKSGNLKFATTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAG 364
           L+     K+G +     +     G+D+  +  V     P + +  + RIGR G
Sbjct: 289 LKALASFKAGEVDLLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTG 341