Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 803 a.a., ATP-dependent helicase, DEAD/DEAH box family, associated with Flp pilus assembly from Sphingobium sp. HT1-2

 Score =  214 bits (545), Expect = 2e-59
 Identities = 206/746 (27%), Positives = 339/746 (45%), Gaps = 83/746 (11%)

Query: 29  GRNTLICSPTGSGKTLSSFIAIINELFRIEKEEGLQNSIYCLYISPLKSLANDIHVNLDE 88
           G + L+ +PTG+GKTL+ F+  + +L     +      ++ LY+SPLK+LA D+  NL  
Sbjct: 34  GEHALLVAPTGAGKTLAGFLPTLADLIGNPAD-----GLHTLYVSPLKALAVDVRRNLLT 88

Query: 89  PLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILNTTPETLAIILNSPKF 148
           P+ E+             IR   R GDT +  K++   + PHIL TTPE+L+++L+ P  
Sbjct: 89  PIEEMG----------LPIRVETRTGDTPSDRKARQRVRPPHILLTTPESLSLLLSYPDA 138

Query: 149 KEKLKTVQWVIIDEIHALADNKRGVHLSISLERLRELTNQEFLRIGCSATVEPLEMVADY 208
               + ++ VI+DE+HA A  KRG  L++S+ RL+ + N +  R+  SATV  ++    +
Sbjct: 139 ALLFEHLRTVIVDEVHAFATQKRGDLLNLSMARLQAI-NPDLRRVALSATVADVDAYRAW 197

Query: 209 LGGYYDDGYKRPVEIVDTRFVRGYDLKLLCPVDDLINKTPKEISEKLYEKLDRL--IQTH 266
           L     DG    V  V        D+ +L P      + P       Y     +  I   
Sbjct: 198 LA---PDGDIDAVTPVLGEAGAEPDVTILIPE----GRVPWSGHSGKYAASQVMAEIAAR 250

Query: 267 ENTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHGSLSKEKRLELEEKLKSGNLKFA 326
           + TL+F NTRG AE +   L   +           HHGSLS E R ++E  + +G L+  
Sbjct: 251 QTTLVFCNTRGLAELIFQEL---WSVNDANLPIAIHHGSLSIEARRKVETAMAAGKLRAL 307

Query: 327 TTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAGHGIGKVAKGRIIALDRDELLEC 386
             ++SL+LG+D   +D V+Q+G+PK    +LQRIGRA H +   ++  +I  +R E LE 
Sbjct: 308 VATASLDLGVDWGNVDCVIQMGAPKGSSRLLQRIGRANHRLDMASEAILIPGNRFEYLEA 367

Query: 387 AVMLKKAMDGFIDKVHIPKGPLDVLIQHIYGIAINGYIELERVKNIVRRSYNYHDITDED 446
              L     G  D      G LDVL QH+  IA  G    E +   VR +  Y  +TDE 
Sbjct: 368 RAALDAVEAGERDADDFRPGALDVLAQHVMAIACAGPFREEELLAEVRSATPYSALTDEG 427

Query: 447 FKILINYMTASYAGMDEKRIYSKIWYDPDTQMIGKTGKTARAI-------YYMNIGTIPD 499
           F  +++++        E   Y+   YD   +++ +   T R         + MN G I D
Sbjct: 428 FAHVLHFI--------EGGGYALRAYDRFKRLVREADGTWRVSHPKFIQQHRMNAGIIVD 479

Query: 500 DFSCDV-YLRGTTIWIGKLDEQYLDRLEKGDVFTLGGEHLKFQYRRGSKVYVDKTSERPN 558
             +  V +  G    +G ++E +   L  GD F   G  L+      S + V  T++   
Sbjct: 480 QPALAVRFANGRK--LGTVEEGFAATLRPGDSFFFSGMALEVVRMDTSDLVVRATAKSAR 537

Query: 559 IPSWYSERLPLSYDLGRNILLFKKEAVSKYNAGRLLDLLSEYPLDSNATKSLYGLFNEQI 618
           IPSW   R+ +S  L   +  F  E  + +   R  D + E+ L+   T+S         
Sbjct: 538 IPSWGGTRMAMSTRLADRVRHFLAEPDAWH---RFPDDVREW-LEVQRTRS--------- 584

Query: 619 LYKGNDSVSTLNKMVVEGHIFDKKMHYYFHSNYGRKFNDGFSRAVAYALSKQYKLGVLVS 678
                 ++    +++VE    + + +   +S  G   +      +   +  Q   G++  
Sbjct: 585 ------ALPQPGQLLVETFPHEGRHYMVCYSFEGWNAHQSLGMLLTRRMDAQ---GLM-- 633

Query: 679 ISDTGFSLEFAKNQKVDIESAIRSLT-PENI--KDVLKQA----LEGTNLLKRMFRINAT 731
                  L F  N        ++ +T P+++   D+L       +E ++LLKR FR  A 
Sbjct: 634 ------PLGFVSNDYALAVYGLKPVTDPQSLFSADILDHEFVDWVEQSSLLKRAFRDVAV 687

Query: 732 RSLMILRNYIGHKKSAKKQQVSADIL 757
            S +I R + G +K+ ++   S D++
Sbjct: 688 ISGLIERQHPGKRKTGRQVTFSTDLI 713