Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 816 a.a., ATP-dependent helicase, DEAD box family from Pseudomonas putida KT2440

 Score =  235 bits (599), Expect = 9e-66
 Identities = 211/837 (25%), Positives = 385/837 (45%), Gaps = 64/837 (7%)

Query: 19  QRLAIPKIHFGRNTLICSPTGSGKTLSSFIAIINELFRIEKEEGLQNSIYCLYISPLKSL 78
           QR     +  G + L+ + TG+GKT + ++A +   F+   +      I  L+++P+++L
Sbjct: 23  QRRVWAAVERGESGLLHASTGAGKTYAVWLAALRA-FKPRPQGRHLAPIQVLWVTPMRAL 81

Query: 79  ANDIHVNLDEPLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILNTTPET 138
           A D    L  PL E++                +R GDT++ E+++  ++ P +L TTPE+
Sbjct: 82  AADTARALQAPLDELQLPWSV----------GVRSGDTNSAERARQARRLPSVLITTPES 131

Query: 139 LAIILNSPKFKEKLKTVQWVIIDEIHALADNKRGVHLSISLERLRELTNQEFLRIGCSAT 198
           L ++L   K +E   T+Q V++DE H L  NKRGV L ++L RLR   +      G SAT
Sbjct: 132 LTLLLTRAKAREDFATLQLVVVDEWHELLGNKRGVQLQLALARLRHW-HPGLPTWGLSAT 190

Query: 199 VEPLEMVADYL---GGYYDDGYKRPVEIVDTRFVRGYDLKLLCPVDDLINKTP--KEISE 253
           +  L+   D L   GG    G +     VDT   +             I + P    +  
Sbjct: 191 LGNLQHARDVLLPQGGLLVQGRQDKALQVDTLLPKA------------IERFPWAGHMGL 238

Query: 254 KLYEKLDRLIQTHENTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHGSLSKEKRLE 313
           K+ +++   I    ++L+FTNTR  AE     L +  P+         HH SL+++ R  
Sbjct: 239 KMLDQVCHEIDASASSLVFTNTRAQAEIWYQALLEARPDWAGLI--ALHHASLARDTRDW 296

Query: 314 LEEKLKSGNLKFATTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAGHGIGKVAKG 373
           +E  LK G+LK    +SSL+LG+D   ++ V+QIGS K +  ++QR GR+GH  G+ ++ 
Sbjct: 297 VERSLKQGSLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLMQRAGRSGHAPGRRSRV 356

Query: 374 RIIALDRDELLECAVMLKKAMDGFIDKVHIPKGPLDVLIQHIYGIAINGYIELERVKNIV 433
            ++     EL+E A   +  + G I+    P+  +DVL+QH+  +A+      E++   V
Sbjct: 357 TLVPTHSLELVEAAAARQALLAGHIEARFSPRLCMDVLVQHLVSMALGSGFRPEQLLAEV 416

Query: 434 RRSYNYHDITDEDFKILINYMTASYAGMDEKRIYSKIWYDPDTQMIGKTGKTARAIYYMN 493
           R ++ +  + D  ++  ++++    + +     Y ++    D      + + AR  + M 
Sbjct: 417 RSTWAFRQLRDSQWQWALDFVCHGGSSLTAYPDYQRVERQADGVYRVTSERLARR-HRMG 475

Query: 494 IGTIPDDFSCDVYL---RGTTIWIGKLDEQYLDRLEKGDVFTLGGEHLKFQYRRGSKVYV 550
           IGTI  D +  +      G    +G ++E ++ RL  GD     G  L+         YV
Sbjct: 476 IGTIVSDANLQLKYWSKGGGGKTLGSVEEAFIARLRPGDTLVFAGRVLELVRVENMTAYV 535

Query: 551 DK-TSERPNIPSWYSERLPLSYDLGRNILLFKKEAVSKYNAGRLLDLLSEYPLDSNATKS 609
            + T+ +  +  W   R+PLS +L   ++               LD  +    +    ++
Sbjct: 536 RRSTARKAAVARWNGGRMPLSSELADALV-------------EQLDAAAHERFEGPEMRA 582

Query: 610 LYGLFNEQILYKGNDSVSTLNKMVVEGHIFDKKMHYYFHSNYGRKFNDGFSRAVAYALSK 669
           +  L   Q  +    + STL   + E     +  H + +   GR  N G +  +A+ +S+
Sbjct: 583 VRPLLALQAQWSALPTTSTL---LAETFKSRQGWHLFLYPFAGRMANLGLANLIAWRVSR 639

Query: 670 QYKLGVLVSISDTGFSLEFAKNQKVDIESAIRSL--TPENIKDVLKQALEGTNLLKRMFR 727
              L V ++++D GF  E     +VD  S +     T + ++DVL     G   L+R FR
Sbjct: 640 AQPLSVSIAVNDYGF--ELLSPAQVDWASHLPQALGTADLLEDVLASLNAGEMALRR-FR 696

Query: 728 INATRSLMILRNYIGHKKSAKKQQVSADILISYAKSLDRFAPLEETLR-EIIEDSLELDN 786
             A  + ++   Y   +KS ++ Q S+ +     +  D    L    R E++ + LE++ 
Sbjct: 697 EIAQIAGLVFGGYPAAQKSTRQIQASSGLFYEVFRKHDAGNLLLGQARDEVLSEELEIER 756

Query: 787 IREVLGEIRSGKLKINVIDVPIPTPMSFGIAT----LTASDSVLAENKNQLLKEFHQ 839
           +   L  ++  +L++++  +  P P++F +       T S   LA+   +++ E  Q
Sbjct: 757 LHRQL--LKMSELQLDLQALRRPGPLAFALLVEGMRETLSTEKLADRIARMVAELEQ 811