Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 888 a.a., ligase-associated DNA damage response DEXH box helicase from Paraburkholderia sabiae LMG 24235

 Score =  232 bits (591), Expect = 8e-65
 Identities = 221/836 (26%), Positives = 377/836 (45%), Gaps = 68/836 (8%)

Query: 19  QRLAIPKIHFGRNTLICSPTGSGKTLSSFIAIINELFRIEKEEGLQNSIYCLYISPLKSL 78
           QR    +I  G + L+ + TG+GKT + +   +   +       L + +  L+I+P+++L
Sbjct: 97  QREVWREIAAGSSGLLHATTGAGKTWAVWFGAM-AAYGDHAPRALADPLTVLWITPMRAL 155

Query: 79  ANDIHVNLDEPLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILNTTPET 138
           A D    L     E+                 +R GDTS+ E+++  ++ P  L TTPE+
Sbjct: 156 AADTARALQSAARELA----------VPWTIGLRTGDTSSTERARQSRRMPSALVTTPES 205

Query: 139 LAIILNSPKFKEKLKTVQWVIIDEIHALADNKRGVHLSISLERLRELTNQEFLRIGCSAT 198
           L+++L     +E+LK V+ VI+DE H L  NKRG    ++L  L      +    G SAT
Sbjct: 206 LSLMLTRSDAREELKHVRLVIVDEWHELLGNKRGTQTQLALAHLARW-RADLQVWGLSAT 264

Query: 199 VEPLEMVADYLGGYYDDGYKRPVEIVDTRFVRGYDLKLLCPVDDLINKTPKE------IS 252
           +  L   AD L          PV       V G   K L  +D LI +T +       + 
Sbjct: 265 LGNLSFAADVL--------LAPVRTPRVS-VSGMQPKTLI-IDTLIPETIERFPWGGHLG 314

Query: 253 EKLYEKLDRLIQTHENTLIFTNTRGGAE---RVLYNLRKRYPEKYDETNSGCHHGSLSKE 309
            +  E +   I     +L+FTNTR  AE   + L  LR  +           HHGSL++E
Sbjct: 315 TRQVEPVAEGIDEARTSLVFTNTRSQAEIWYQALLALRPDWAGLI-----ALHHGSLAQE 369

Query: 310 KRLELEEKLKSGNLKFATTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAGHGIGK 369
            R  +E+ LK+G LK    +SSL+LG+D   ++ V QIGSPK V  ++QR GR+GH  G+
Sbjct: 370 VREWVEDGLKNGKLKAVVCTSSLDLGVDFLPVERVFQIGSPKGVARLMQRAGRSGHAPGR 429

Query: 370 VAKGRIIALDRDELLECAVMLKKAMDGFIDKVHIPKGPLDVLIQHIYGIAINGYIELERV 429
            ++  I+     EL+E A   +      I+    P+ P DVL+QH+  +A+ G  +   +
Sbjct: 430 ASRITIVPTHALELVEAAAARRAVEARRIEGRETPRKPFDVLVQHLVTVAVGGGFKAPEL 489

Query: 430 KNIVRRSYNYHDITDEDFKILINYMTASYAGMDEKRIYSKIWYDPDTQMIGKTGKTARAI 489
            + VR ++ Y D+  ++F   + ++      +     + ++  D D     +     R  
Sbjct: 490 FDEVRTTFAYRDLPQQEFDWALAFVERGGPSLRAYPDFHRVVRDEDGVYRVQRDDLIRR- 548

Query: 490 YYMNIGTIPDDFSCDV-YLRGTTIWIGKLDEQYLDRLEKGDVFTLGGEHLKFQYRRGSKV 548
           +  N+GTI  + +  V +L G    IG ++E ++ RL+ GDVFT GG  L+    R    
Sbjct: 549 HRNNVGTIVANATLHVAWLTGGR--IGSMEESFISRLKPGDVFTFGGRALELVRVRDMTA 606

Query: 549 YVDK-TSERPNIPSWYSERLPLSYDLGRNILLFKKEA-VSKYNAGRLLDLLSEYPLDSN- 605
           YV + +S R  +P W   ++PLS +L    L    EA    Y    ++ +     L +N 
Sbjct: 607 YVRRASSSRGAMPQWAGSKMPLSSELADAALAILAEAGRGDYVEPEMIAIRPLLELQANW 666

Query: 606 ATKSLYGLFNEQILYKGNDSVSTLNKMVVEGHIFDKKMHYYFHSNYGRKFNDGFSRAVAY 665
           +     G+   ++L               EGH      H++ +   GR  + G +  + +
Sbjct: 667 SALPEAGVLVAEML------------RTREGH------HFFCYPFAGRIAHIGLASLLGW 708

Query: 666 ALSKQYKLGVLVSISDTGFSLEFAKNQKVDIESAIRS--LTPENIKDVLKQALEGTNLLK 723
             +++      ++ +D GF  E   +Q  D  + I     +P  +   +  +L  + L  
Sbjct: 709 RAAREQPGTFSIAANDYGF--ELLSSQPFDWPTLIEEGLFSPTRLAGDIMDSLNASELAM 766

Query: 724 RMFRINATRSLMILRNYIGHKKSAKKQQVSADILISYAKSLDR-FAPLEETLREIIEDSL 782
           R FR  A  + ++ + + G +KSA++ Q S+ +     +  D     L +   E++   L
Sbjct: 767 RRFREIARVAGLVYQAHPGQQKSARQLQASSGLFYEVFRKHDSDNLLLAQADTEVMLQEL 826

Query: 783 ELDNIREVLGEIRSGKLKINVIDVPIP--TPMSFGIATLTASDSVLAENKNQLLKE 836
           ELD ++  L  + + +L +     P P   P+  G      S   LA+   ++L E
Sbjct: 827 ELDRMKRALDAMSTSRLALTRPKKPTPFAFPLIVGRIREKVSTEKLADRIERMLAE 882