Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 759 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

 Score =  103 bits (256), Expect = 5e-26
 Identities = 100/375 (26%), Positives = 165/375 (44%), Gaps = 46/375 (12%)

Query: 2   NKFEPYKSINNGYFTPPQRLAIPKIHFGRNTLICSPTGSGKTLSSFIAIINELFRIEKEE 61
           + FE Y    N      Q  A+  +  G+N L+ + T SGKTLS  + I+         E
Sbjct: 48  DNFEEYLLKKNKKLYTHQYSALENVRIGKNILLTTSTASGKTLSFNLPIL---------E 98

Query: 62  GLQNS--IYCLYISPLKSLANDIHVNLDEPLTEIKEILKEEGNEITGIRHAIRHGDTSNY 119
            LQN      LYI P K+L ND   NL     E+   LK E          I  GDT N 
Sbjct: 99  TLQNDKDATALYIYPTKALTNDQLNNLKNLENELNITLKPE----------IYDGDTPNS 148

Query: 120 EKSKMLKKTPHILNTTPETLAIILNSPKFKEKLKTVQWVIIDEIHALADNKRGVHLSISL 179
           ++  + +K+  IL    E   ++  +PK+    K +++++IDE H       G ++S  +
Sbjct: 149 KRKSIREKSRIILTNPHELHQVLQYNPKWMSFFKNLKYIVIDEAHTYR-GIFGSNISFLI 207

Query: 180 ERLRELTNQ-----EFLRIGCSATVEPLEMVADYLGGYYDDGYKRPVEIVDTRFVRGYDL 234
            RLR +        +F  I  SAT+   +  ++ L G            +D R +     
Sbjct: 208 RRLRRICEDYGSYPQF--ILASATLANAKEFSEKLVG------------LDFRVIDKDGS 253

Query: 235 KLLCPVDDLINKTPKEISEKLYEK-----LDRLIQTHENTLIFTNTRGGAERVLYNLRKR 289
                     N    EISE  +       L+  ++    T+ FT +R  AE +    +K 
Sbjct: 254 PKNKKYFVFYNTLKNEISESSWYSSAINILELCMKYGLQTIGFTLSRKMAELITIWTKKS 313

Query: 290 YPEKYDETNSGCHHGSLSKEKRLELEEKLKSGNLKFATTSSSLELGIDMPYIDLVVQIGS 349
                       +    + E+R ++E +LK+G+L+  T++++LE+GID+  +D V+  G 
Sbjct: 314 LGNNILSRKISSYRSGFTPEERRDIESRLKNGDLRAVTSTNALEVGIDIGSLDSVIMYGY 373

Query: 350 PKSVKTMLQRIGRAG 364
           P ++ ++ Q+ GRAG
Sbjct: 374 PGTLMSLWQQAGRAG 388