Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 792 a.a., large atp-dependant helicase-related protein from Agrobacterium fabrum C58

 Score =  245 bits (625), Expect = 8e-69
 Identities = 228/830 (27%), Positives = 405/830 (48%), Gaps = 68/830 (8%)

Query: 33  LICSPTGSGKTLSSFIAIINELF---RIEKEEGLQNSIYCLYISPLKSLANDIHVNLDEP 89
           L+ +PTG+GKTL  F+A + +L    ++    G    ++ LYISPLK+LA DI  NL  P
Sbjct: 2   LLIAPTGAGKTLGGFMASLTDLAERGKVPPGSGFVG-VHTLYISPLKALAVDIERNLTRP 60

Query: 90  LTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILNTTPETLAIILNSPKFK 149
           ++E+   +  E           R GDT   ++ +   K P IL TTPE ++++L + + +
Sbjct: 61  VSEMGLPIVIE----------TRTGDTPQAKRQRQKVKPPDILLTTPEQVSLLLANKEAE 110

Query: 150 EKLKTVQWVIIDEIHALADNKRGVHLSISLERLRELTNQEFLRIGCSATV-EPLEMVADY 208
              + +++V++DE+H+L  +KRG  LS++L R+R     +   IG SATV EP+++   Y
Sbjct: 111 RFFRDLKYVVLDELHSLVTSKRGHLLSLALARVRRHA-PDVRFIGLSATVAEPMDL-RRY 168

Query: 209 LGGYYDDGYKRPVEIVDTRFVRGYDLKLLCPVDDL--INKTPKEISEKLYEKLDRLIQTH 266
           L        + P  ++        D+ +L   + +     + +   + LYE L +    H
Sbjct: 169 LAPQGQG--EPPAGLITVEGGAKPDISILHTEERIPWSGHSARYAGKDLYEALKQ----H 222

Query: 267 ENTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHGSLSKEKRLELEEKLKSGNLKFA 326
           + TL+F NTR  AERV   L   +    D      HHGSL   +R  +E  +    L+  
Sbjct: 223 QTTLVFVNTRSQAERVFQEL---WTVNDDNLPIALHHGSLDAGQRRRVEAAMAENKLRAV 279

Query: 327 TTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAGHGIGKVAKGRIIALDRDELLEC 386
             +S+L+LGID   +DLVV +G+PK    + QRIGR+ H + + +K  ++  +R E++EC
Sbjct: 280 VATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRIGRSNHRMDEPSKAILVPANRFEVMEC 339

Query: 387 AVMLKKAMDGFIDKVHIPKGPLDVLIQHIYGIAINGYIELERVKNIVRRSYNYHDITDED 446
              L     G  D   I +G LDVL QH+ G+A     + + +   V  +  Y ++    
Sbjct: 340 RAALDANYIGAQDTPPIAEGALDVLAQHVLGMACAEPFDADELYREVTSASPYANLPRAT 399

Query: 447 FKILINYM-TASYAGMDEKRIYSKIWYDPDTQMIGKTGKTARAIYYMNIGTIPDDFSCDV 505
           F  ++++  T  YA    +R Y++I    D +        A+  Y +N+GTI +    +V
Sbjct: 400 FDRVVDFTATGGYALRTYER-YARIRQMKDGRWRVSNPAVAQQ-YRLNLGTIVEAAELNV 457

Query: 506 YL-----RGTT----IWIGKLDEQYLDRLEKGDVFTLGGEHLKFQYRRGSKVYVDKT-SE 555
            +     +GT     + +GK++E +L++L +GD F   G+ L+F+  R ++  V +  S 
Sbjct: 458 RMVKRNAKGTVGRGGMSLGKVEEYFLEQLVQGDTFLFAGKVLRFEGIRENECLVSQAFSM 517

Query: 556 RPNIPSWYSERLPLSYDLGRNILLFKKEAVSKYNAGRLLDLLSEYPLDSNATKSLYGLFN 615
            P IPS+   + PLS  L   +     +  +++ A  L D + ++ L+    KS+    +
Sbjct: 518 DPKIPSYAGGKFPLSTYLADQVRSMLADP-ARWQA--LPDQVRDW-LEIQKEKSIIPKRD 573

Query: 616 EQILYKGNDSVSTLNKMVVEGHIFDKKMHYYFHSNYGRKFNDGFSRAVAYAL---SKQYK 672
           E ++    ++     +  +  + F+ ++    H   G        RA A  +   +  Y 
Sbjct: 574 ELLV----ETFPFRKRFFMVMYPFEGRLA---HQTLGMLLTRRLERAGAKPMGFVATDYS 626

Query: 673 LGVLVSISDTGFSLEFAKNQKVDIESAIRSLTPENIKDVLKQALEGTNLLKRMFRINATR 732
           L +  ++ D G  L+  +    D+      L  + + D L+  L+ + +LKR FR  A  
Sbjct: 627 LAIW-AMEDIGMRLKSRRLSLADL------LDEDMLGDDLEAWLDESFMLKRTFRNCAVI 679

Query: 733 SLMILRNYIGHKKSAKKQQVSADILISYAKSLD-RFAPLEETLREIIEDSLELDNIREVL 791
           S +I R + G +K+ ++  VSAD++    +S +     LE T R+     L++  + ++L
Sbjct: 680 SGLIERRHPGKEKTGRQVTVSADLIYDVLRSHEPDHILLEATRRDAAAGLLDIGRLGDML 739

Query: 792 GEIR---SGKLKINVIDVPIPTPMSFGIATLT--ASDSVLAENKNQLLKE 836
             I+   + +   +V  + +P  +  G  T+   A D VLAE  ++L+ E
Sbjct: 740 KRIKGHTTHRALEHVSPLAVPVMLEIGRETVAGEAMDDVLAEAADELIAE 789