Pairwise Alignments

Query, 81 a.a., ferredoxin family protein from Methanococcus maripaludis S2

Subject, 524 a.a., hydrogenase iron-sulfur subunit from Magnetospirillum magneticum AMB-1

 Score = 38.9 bits (89), Expect = 6e-08
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 6   IVDKEKCTGCGKCYDKCPKGPRIYKKDKDG-----KYYAFDVSDCHNCKICVAAC 55
           +V  + C GCG C   CP G  + +   DG     K        C +C +C+A+C
Sbjct: 296 VVTSDLCNGCGNCASDCPFGAVVLRPRTDGLHSSPKLAVMQPDLCTSCGMCMASC 350



 Score = 25.4 bits (54), Expect = 7e-04
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 6   IVDKEKCTGCGKCYDKCPKGPRIYKKDKDGKYYAFDVSD 44
           ++  + CT CG C   C K         + +  A D+ D
Sbjct: 334 VMQPDLCTSCGMCMASCNKTNPFLPHTGETRQTAIDIPD 372



 Score = 23.9 bits (50), Expect = 0.002
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 45  CHNCKICVAACPVGAI 60
           C+ C  C + CP GA+
Sbjct: 302 CNGCGNCASDCPFGAV 317