Pairwise Alignments

Query, 713 a.a., RNA-binding transcriptional accessory protein from Methanococcus maripaludis S2

Subject, 713 a.a., RNA-binding transcriptional accessory protein from Methanococcus maripaludis S2

 Score = 1379 bits (3568), Expect = 0.0
 Identities = 713/713 (100%), Positives = 713/713 (100%)

Query: 1   MDIFQQLQKEFNLKTFQVENTVKLIDEGNTIPFISRYRKEATGSLDDVVLRKFFDRLNYL 60
           MDIFQQLQKEFNLKTFQVENTVKLIDEGNTIPFISRYRKEATGSLDDVVLRKFFDRLNYL
Sbjct: 1   MDIFQQLQKEFNLKTFQVENTVKLIDEGNTIPFISRYRKEATGSLDDVVLRKFFDRLNYL 60

Query: 61  RNLEDKKAQIIKLIDEQGKLTAELKQKIEKSELLTELEDIYRPFRPKRKTRATIAESKGL 120
           RNLEDKKAQIIKLIDEQGKLTAELKQKIEKSELLTELEDIYRPFRPKRKTRATIAESKGL
Sbjct: 61  RNLEDKKAQIIKLIDEQGKLTAELKQKIEKSELLTELEDIYRPFRPKRKTRATIAESKGL 120

Query: 121 KPLSELILKQILEKPIEELAEGFVNPELEVNSVEDAISGAKDIIAEEISDNADYRKFIRE 180
           KPLSELILKQILEKPIEELAEGFVNPELEVNSVEDAISGAKDIIAEEISDNADYRKFIRE
Sbjct: 121 KPLSELILKQILEKPIEELAEGFVNPELEVNSVEDAISGAKDIIAEEISDNADYRKFIRE 180

Query: 181 NTFSEGIISVKAKNVDEKSVYEMYYEYSEAINKIPGHRILAINRGESEKILQVKLDAPVE 240
           NTFSEGIISVKAKNVDEKSVYEMYYEYSEAINKIPGHRILAINRGESEKILQVKLDAPVE
Sbjct: 181 NTFSEGIISVKAKNVDEKSVYEMYYEYSEAINKIPGHRILAINRGESEKILQVKLDAPVE 240

Query: 241 FIHDWIFKNIILENSQTSEILKDTVIDSYKRLIAPSIEREIRNSLTEKAENGAIEVFSKN 300
           FIHDWIFKNIILENSQTSEILKDTVIDSYKRLIAPSIEREIRNSLTEKAENGAIEVFSKN
Sbjct: 241 FIHDWIFKNIILENSQTSEILKDTVIDSYKRLIAPSIEREIRNSLTEKAENGAIEVFSKN 300

Query: 301 LKQLLLQPPIKNKTVLGWDPAFRTGCKIALVDETGKVLDKTVVYPTEPHNKVTETKKQVK 360
           LKQLLLQPPIKNKTVLGWDPAFRTGCKIALVDETGKVLDKTVVYPTEPHNKVTETKKQVK
Sbjct: 301 LKQLLLQPPIKNKTVLGWDPAFRTGCKIALVDETGKVLDKTVVYPTEPHNKVTETKKQVK 360

Query: 361 ELIIKYDIDVVAIGNGTASRESEHIVSEILKEVVNDVYYVIVNEAGASVYSASELGSDEF 420
           ELIIKYDIDVVAIGNGTASRESEHIVSEILKEVVNDVYYVIVNEAGASVYSASELGSDEF
Sbjct: 361 ELIIKYDIDVVAIGNGTASRESEHIVSEILKEVVNDVYYVIVNEAGASVYSASELGSDEF 420

Query: 421 PEYDVGIRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDMNQKKLSESLGAVVESSVNS 480
           PEYDVGIRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDMNQKKLSESLGAVVESSVNS
Sbjct: 421 PEYDVGIRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDMNQKKLSESLGAVVESSVNS 480

Query: 481 VGVDLNTASVSLLNYVSGINIGIAKNIVAYRTENGKFESRKELLKVSKLGKKAFEQCAGF 540
           VGVDLNTASVSLLNYVSGINIGIAKNIVAYRTENGKFESRKELLKVSKLGKKAFEQCAGF
Sbjct: 481 VGVDLNTASVSLLNYVSGINIGIAKNIVAYRTENGKFESRKELLKVSKLGKKAFEQCAGF 540

Query: 541 LRIPEGKNLFDNTGVHPESYKIAENLLNELNISIKDIKEKKIDKISEKVDIEKLAEKLDC 600
           LRIPEGKNLFDNTGVHPESYKIAENLLNELNISIKDIKEKKIDKISEKVDIEKLAEKLDC
Sbjct: 541 LRIPEGKNLFDNTGVHPESYKIAENLLNELNISIKDIKEKKIDKISEKVDIEKLAEKLDC 600

Query: 601 GIPTLEDIIKELEKPGRDPREDLPKPVLRSDVLELEDLKEGMILKGTVRNIVDFGAFIDI 660
           GIPTLEDIIKELEKPGRDPREDLPKPVLRSDVLELEDLKEGMILKGTVRNIVDFGAFIDI
Sbjct: 601 GIPTLEDIIKELEKPGRDPREDLPKPVLRSDVLELEDLKEGMILKGTVRNIVDFGAFIDI 660

Query: 661 GVHHDGLAHISEIADRFIKHPLDVISVGDIVDVMVMDIDFDKKRVSLSIKRAK 713
           GVHHDGLAHISEIADRFIKHPLDVISVGDIVDVMVMDIDFDKKRVSLSIKRAK
Sbjct: 661 GVHHDGLAHISEIADRFIKHPLDVISVGDIVDVMVMDIDFDKKRVSLSIKRAK 713