Pairwise Alignments

Query, 713 a.a., RNA-binding transcriptional accessory protein from Methanococcus maripaludis S2

Subject, 557 a.a., 30S ribosomal protein S1 from Dickeya dianthicola ME23

 Score = 78.6 bits (192), Expect = 8e-19
 Identities = 36/77 (46%), Positives = 59/77 (76%), Gaps = 1/77 (1%)

Query: 635 LEDLKEGMILKGTVRNIVDFGAFIDIGVHHDGLAHISEIADRFIKHPLDVISVGDIVDVM 694
           LE+L+EGM +KG V+N+ D+GAF+D+G   DGL HI+++A + +KHP ++++VGD + V 
Sbjct: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244

Query: 695 VMDIDFDKKRVSLSIKR 711
           V+  D ++ RVSL +K+
Sbjct: 245 VLKFDRERTRVSLGLKQ 261



 Score = 68.9 bits (167), Expect = 6e-16
 Identities = 34/76 (44%), Positives = 54/76 (71%), Gaps = 3/76 (3%)

Query: 640 EGMILKGTVRNIVDFGAFIDIGVHHDGLAHISEI--ADRFIKHPLDVISVGDIVDVMVMD 697
           EG  L G V N+ D+G F++I    +GL H+SE+   ++ I HP  V++VGD+V+VMV+D
Sbjct: 276 EGTRLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLD 334

Query: 698 IDFDKKRVSLSIKRAK 713
           ID +++R+SL +K+ K
Sbjct: 335 IDEERRRISLGLKQCK 350



 Score = 45.1 bits (105), Expect = 1e-08
 Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 1/77 (1%)

Query: 636 EDLKEGMILKGTVRNIVDFGAFIDIGVHHDGLAHISEIADRFI-KHPLDVISVGDIVDVM 694
           E   +G  ++G +++I DFG FI +    DGL H+S+I+     +  +     GD +  +
Sbjct: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418

Query: 695 VMDIDFDKKRVSLSIKR 711
           V+ +D +++R+SL +K+
Sbjct: 419 VLQVDAERERISLGVKQ 435