Pairwise Alignments

Query, 713 a.a., RNA-binding transcriptional accessory protein from Methanococcus maripaludis S2

Subject, 750 a.a., Transcriptional accessory protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  625 bits (1613), Expect = 0.0
 Identities = 334/713 (46%), Positives = 479/713 (67%), Gaps = 12/713 (1%)

Query: 4   FQQLQKEFNLKTFQVENTVKLIDEGNTIPFISRYRKEATGSLDDVVLRKFFDRLNYLRNL 63
           + ++ +E N++  QV +T++L+DEG T+PFISRYRKE TGSLD+V +    DR+  LR+L
Sbjct: 6   YLKIAEELNIRQKQVSDTIELLDEGATVPFISRYRKEVTGSLDEVQVAAIRDRVQQLRDL 65

Query: 64  EDKKAQIIKLIDEQGKLTAELKQKIEKSELLTELEDIYRPFRPKRKTRATIAESKGLKPL 123
           + ++  I+K I EQ KLT EL+ KI  +E +  LED+Y P++PKR+T+ATIA  KGL+PL
Sbjct: 66  DKRREAILKSIKEQEKLTPELEGKINDAETMAALEDLYLPYKPKRRTKATIAREKGLEPL 125

Query: 124 SELILKQILEKPIEELAEGFVNPELEVNSVEDAISGAKDIIAEEISDNADYRKFIRENTF 183
           +E I  Q     +EE A+ +++ E EV S E+A+ GA+DIIAE +++NA+ RK +R+   
Sbjct: 126 AEKIFGQE-SCDLEEEAKAYIDEEKEVGSTEEALQGARDIIAEWVNENAELRKKMRDLFI 184

Query: 184 SEG-IISVKAKNVDEKSV-YEMYYEYSEAINKIPGHRILAINRGESEKILQVKLDAPVEF 241
            EG  +S      +E+++ Y+ Y+E+SE I   P HR+LA+ RGE E  L   LD+  E 
Sbjct: 185 EEGKFVSKVIPGKEEEAIKYKDYFEWSEPIKTAPSHRVLAMRRGEKELFLM--LDSCPEE 242

Query: 242 IHDWIF--KNIILENSQTSEILKDTVIDSYKRLIAPSIEREIRNSLTEKAENGAIEVFSK 299
           +       K  +   + +SE +K  + D YKRL+ PS+E E+R    +KA+  AI+VF++
Sbjct: 243 LDALALMEKMTVTAQNTSSEQVKLAIKDCYKRLMKPSMETEVRLYTKKKADEDAIKVFAE 302

Query: 300 NLKQLLLQPPIKNKTVLGWDPAFRTGCKIALVDETGKVLDKTVVYPTEPHNKVTETKKQV 359
           NL+QLLL  P+  K+V+  DP FRTGCK+A +   G+VL    +YP EP  K  E+   V
Sbjct: 303 NLRQLLLGAPLGEKSVMAIDPGFRTGCKLACLGPQGQVLHYDAIYPNEPQRKKAESAALV 362

Query: 360 KELIIKYDIDVVAIGNGTASRESEHIVSEILKEVVNDVYYVIVNEAGASVYSASELGSDE 419
           K L+ K+ ++ +AIGNGTASRE+E     I   +  +V  V+VNE+GAS+YSASE+  +E
Sbjct: 363 KHLVEKHQVEAIAIGNGTASRETEQFFKSI--GLPQNVLIVMVNESGASIYSASEVAREE 420

Query: 420 FPEYDVGIRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDMNQKKLSESLGAVVESSVN 479
           FP+ D+ IR A+SI RRL DPLAELVKIDPKSIGVGQYQHD++Q  L  SL   V S VN
Sbjct: 421 FPDLDLTIRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQSALKNSLDDTVMSCVN 480

Query: 480 SVGVDLNTASVSLLNYVSGINIGIAKNIVAYRTENGKFESRKELLKVSKLGKKAFEQCAG 539
            VGV++NTAS  LL YVSG+   +A+NIV +R ENG F+SR+++ KV +LG KA+EQ AG
Sbjct: 481 GVGVEVNTASKQLLTYVSGLGPALAQNIVNFRNENGPFKSREDIRKVPRLGDKAYEQAAG 540

Query: 540 FLRIPEGKNLFDNTGVHPESYKIAENLLNELNISIKDIKEKKIDKISEKVDIEKLAEKLD 599
           FLRI    N  D + VHPE Y + + +  +L  ++ D+   K +++  KV ++    +  
Sbjct: 541 FLRIQNAPNPLDRSAVHPERYDLVQQMATDLGSNVSDL--IKDEELRSKVVLKNYVTE-T 597

Query: 600 CGIPTLEDIIKELEKPGRDPREDLPKPVLRSDVLELEDLKEGMILKGTVRNIVDFGAFID 659
            G+PTL+DI++EL KPGRDPRE       +  V E++DLK GM L G + NI +FGAF+D
Sbjct: 598 VGLPTLQDIMEELAKPGRDPRETFEVFSFQEGVNEMKDLKVGMKLPGIITNITNFGAFVD 657

Query: 660 IGVHHDGLAHISEIADRFIKHPLDVISVGDIVDVMVMDIDFDKKRVSLSIKRA 712
           +GVH DGL H+S +ADR+I  P +V++V   V+V VM++D ++KR+ LS+K A
Sbjct: 658 VGVHQDGLVHLSHLADRYISDPNEVVTVNQKVEVTVMEVDLNRKRIGLSMKSA 710