Pairwise Alignments

Query, 713 a.a., RNA-binding transcriptional accessory protein from Methanococcus maripaludis S2

Subject, 592 a.a., Ribosomal protein S1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 73.9 bits (180), Expect = 2e-17
 Identities = 35/77 (45%), Positives = 57/77 (74%), Gaps = 1/77 (1%)

Query: 635 LEDLKEGMILKGTVRNIVDFGAFIDIGVHHDGLAHISEIADRFIKHPLDVISVGDIVDVM 694
           L +L++G +L+G ++N+ +FG FID+G   DGL HI++I+   I HP +V+++ D V V+
Sbjct: 205 LNNLEKGQVLEGVIKNMTNFGVFIDLG-GVDGLLHITDISWGRINHPEEVLNLDDKVQVV 263

Query: 695 VMDIDFDKKRVSLSIKR 711
           V+D D DKKR+SL +K+
Sbjct: 264 VLDFDDDKKRISLGMKQ 280



 Score = 60.8 bits (146), Expect = 2e-13
 Identities = 25/76 (32%), Positives = 54/76 (71%), Gaps = 1/76 (1%)

Query: 637 DLKEGMILKGTVRNIVDFGAFIDIGVHHDGLAHISEIA-DRFIKHPLDVISVGDIVDVMV 695
           +L+ G  +KG + N+ D+GAF+++    +GL H+SE++  + +++P D + VGD ++ +V
Sbjct: 292 ELEVGSKVKGKIVNVADYGAFLELAPGVEGLIHVSEMSWSQHLRNPADFVKVGDEIEAVV 351

Query: 696 MDIDFDKKRVSLSIKR 711
           + +D +++++SL IK+
Sbjct: 352 LTLDKEERKMSLGIKQ 367



 Score = 60.1 bits (144), Expect = 3e-13
 Identities = 35/123 (28%), Positives = 71/123 (57%), Gaps = 6/123 (4%)

Query: 590 DIEKLAEKLDCGIPTLEDIIKELEKPGRDPREDLPKPVLRSDVLELEDLKEGMILKGTVR 649
           D  K+ ++++  + TL+   KE  K     ++    P  + D++    +  G   +G VR
Sbjct: 339 DFVKVGDEIEAVVLTLD---KEERKMSLGIKQLTEDPWTKQDMVTKYAV--GTKHQGVVR 393

Query: 650 NIVDFGAFIDIGVHHDGLAHISEIA-DRFIKHPLDVISVGDIVDVMVMDIDFDKKRVSLS 708
           N+ +FG F+++    DGL H+S+++  + IKHP + + V D ++V+V+++D D +R++L 
Sbjct: 394 NLTNFGLFLELEEGIDGLVHVSDLSWTKKIKHPSEYVKVNDELEVVVLELDVDNRRLALG 453

Query: 709 IKR 711
            K+
Sbjct: 454 HKQ 456



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%)

Query: 635 LEDLKEGMILKGTVRNIVDFGAFIDIGVHHDGLAHISEIADRFIKHPLDVISVGDIVDVM 694
           L ++ E  ++KGTV  I D    I+IG   DGL   +E  D      L  + +GD V++ 
Sbjct: 37  LTEISEKEVIKGTVVGINDKDVIINIGFKSDGLVPRTEFRD------LPDLKIGDEVELF 90

Query: 695 VMDIDFDKKRVSLSIKRAK 713
           + + +    ++ LS K+AK
Sbjct: 91  IEEQENALGQLVLSRKKAK 109