Pairwise Alignments

Query, 265 a.a., NOL1/NOP2/sun family putative RNA methylase from Methanococcus maripaludis S2

Subject, 454 a.a., Ribosomal RNA small subunit methyltransferase B from Xanthobacter sp. DMC5

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 14/233 (6%)

Query: 7   IRVNTLKISSEELKTRLEEKGVNLEDTFLD-YVFRVVKSPFSMGSTPEYLLGYYFLQSIS 65
           +RVN +K    ++ + L   G+  E + L  Y  RV + P ++        G   +Q   
Sbjct: 178 LRVNPIKADRVQMLSALRALGLPAELSPLSPYGIRVNERP-ALNRLAMLKTGELEIQDEG 236

Query: 66  SIIPSITLNPSKDDEVLDMCAAPGGKTTHLAQLMENEGSILAVEINKNRLKSLRSNINRM 125
           S + ++ ++    + V+D CA  GGKT  +A  M+N+G ++A ++ +NRLK       R 
Sbjct: 237 SQLVAVVVDAKPGERVVDFCAGAGGKTLAIAAQMKNKGHVIACDVLENRLKRAAERFRRA 296

Query: 126 GFKN----TLMINTNAVNIDKKLRFDKILLDAPCTGNEVKDSNRVKTKR------DILFC 175
           G  N     L   T+      K  FD++L+DAPC+G      N     R      D L  
Sbjct: 297 GLHNIETRPLASETDRWVKRHKGGFDRVLVDAPCSGTGTWRRNPDARWRVLGPGLDALL- 355

Query: 176 AKRQVELFRTAIEVLKDGGELVYSTCSPEIEEDEDIVRYILKTNKNMELIELT 228
              Q  +  +A  ++K GG LVY+TCS   EE+E+ V   L  +    ++ L+
Sbjct: 356 -PLQARILASAARLVKPGGRLVYATCSLLAEENEEQVAAFLAAHPAFRVVPLS 407