Pairwise Alignments

Query, 265 a.a., NOL1/NOP2/sun family putative RNA methylase from Methanococcus maripaludis S2

Subject, 506 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Escherichia coli ECRC98

 Score =  132 bits (331), Expect = 2e-35
 Identities = 102/276 (36%), Positives = 147/276 (53%), Gaps = 22/276 (7%)

Query: 7   IRVNTLKISSEELKTRLEEKGVNL------EDTFLDYVFRVVKSPFSMGSTPEYLLGYYF 60
           IRVNTLK S  +        G  L      E+ F  ++ R  +    +GST E+L G ++
Sbjct: 68  IRVNTLKTSVADFLRLTAPYGWTLTPIPWCEEGF--WIERDDEDALPLGSTAEHLSGLFY 125

Query: 61  LQSISSIIPSITL--NPSKDDEVLDMCAAPGGKTTHLAQLMENEGSILAVEINKNRLKSL 118
           +Q  SS++P   L  + +    V+D+ AAPG KTT +A  M NEG+ILA E + +R+K L
Sbjct: 126 IQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVL 185

Query: 119 RSNINRMGFKNTLMINTNAVNIDKKL--RFDKILLDAPCTGNEV--KDSNRVK--TKRDI 172
            +NI+R G  N  + + +       L   FD ILLDAPC+G  V  KD + +K  +    
Sbjct: 186 HANISRCGISNVALTHFDGRVFGAALPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESN 245

Query: 173 LFCAKRQVELFRTAIEVLKDGGELVYSTCSPEIEEDEDIVRYILKTNKN-MELIELTVDD 231
              A  Q EL  +A   L+ GG LVYSTC+   EE+E +  ++ +T  + +E + L  D 
Sbjct: 246 QEIAATQRELIDSAFHALRSGGTLVYSTCTLNREENESVCLWLKETYPDAVEFLPLG-DL 304

Query: 232 FPGINMIEGEVKGTLKVIP---PNEPFFIAKFRKTK 264
           FPG N    E +G L V P     E FF+A+ RKT+
Sbjct: 305 FPGANKALTE-EGFLHVFPQIYDCEGFFVARLRKTQ 339