Pairwise Alignments

Query, 265 a.a., NOL1/NOP2/sun family putative RNA methylase from Methanococcus maripaludis S2

Subject, 429 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Escherichia coli ECRC100

 Score =  105 bits (261), Expect = 2e-27
 Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 17/264 (6%)

Query: 6   FIRVNTLKISSEELKTRLEEKGVNLEDTFLDYVFRV-VKSPFSMGSTPEYLLGYYFLQSI 64
           ++R+N    S +     L+E G+       DY   V +++P  + + P +  G+  +Q  
Sbjct: 175 WLRINRTHHSRDTWLALLDEAGMK-GFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA 233

Query: 65  SSIIPSITLNPSKDDEVLDMCAAPGGKTTHLAQLMENEGSILAVEINKNRLKSLRSNINR 124
           S+      L P   + +LD+CAAPGGKTTH+ ++   E  ++AV+I++ RL  +  N+ R
Sbjct: 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKR 292

Query: 125 MGFKNTLMINTNAVNID--KKLRFDKILLDAPCTGNEV----KDSNRVKTKRDILFCAKR 178
           +G K T+             + +FD+ILLDAPC+   V     D   ++  RDI   A+ 
Sbjct: 293 LGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352

Query: 179 QVELFRTAIEVLKDGGELVYSTCSPEIEEDEDIVRYILKTNKNMELIELTVDDFPGINMI 238
           Q E+       LK GG LVY+TCS   EE+   ++  L+   + EL E    + PG   +
Sbjct: 353 QSEILDAIWPHLKSGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNL 412

Query: 239 EGEVKGTLKVIPPNEPFFIAKFRK 262
            G  +G        + FF AK  K
Sbjct: 413 PGAEEG--------DGFFYAKLIK 428