Pairwise Alignments

Query, 438 a.a., B12-binding domain-containing radical SAM protein from Methanococcus maripaludis S2

Subject, 480 a.a., hopanoid biosynthesis associated radical SAM protein HpnJ from Magnetospirillum magneticum AMB-1

 Score = 45.8 bits (107), Expect = 3e-09
 Identities = 78/353 (22%), Positives = 131/353 (37%), Gaps = 55/353 (15%)

Query: 31  NKYRDISANAYFIENYSKIKNSDAILITLQYENDYFNVVKIVKELKAQNPNAIFIAGGPC 90
           +K  D  A+   +++  K+     +L+       Y +  K+ +  KA NPN +    G  
Sbjct: 48  SKLVDAPASGKTLDDCLKLAKDYELLVIYAGAATYASECKVAEAFKAANPNIMIGMVGAH 107

Query: 91  AISNPLPIQEFFD-VFVVGEIEGTDTMYQLINGN--FEIPGVYVPKTYNNEK-------- 139
             + P P     D +  V   E   T+ ++  G    EI G+    T+  E         
Sbjct: 108 VATVPEPSLLASDAIDFVARHEFDYTIVEVAEGKPFAEIDGL----TFRGEDGKPVHTKD 163

Query: 140 ------------IKRIYPKKLGIDDYPISQVTHESGAYGKAYLLEIGRGCIRNCKFCMAK 187
                       +  +Y + L  DDY I  + H   A+        GRGC   C FC+  
Sbjct: 164 RAMIHDMDALPFVGPVYRRDLNPDDYFIGYIRHPYMAF------YTGRGCKSKCSFCLWP 217

Query: 188 CIYAPPRYRKIEDLKHLVDEGLKNTDADKVSLIAPSVSDYRYVLDLCAHISEKNVSIS-- 245
                  YR     K +++E            + P V ++ +  D      E+   I+  
Sbjct: 218 QTIGGRVYR-ARSAKSVIEE------VTLARQMFPEVREFFFDDDTFTDDLERVEEIAKG 270

Query: 246 ------PSSLRADT----ITDELLEYLNLKTLTIAPEAGSEVLRKKIDKGITEENILNAV 295
                 P S  A       T E+L+   L+ L +  E+G + +   I KG+  + I    
Sbjct: 271 IGHLGVPWSCNAKANIPRKTLEVLKANGLRVLVVGYESGVQEILNNIRKGLRIDIIKRFS 330

Query: 296 DIAKTHGISTVKLYYMVGFPDETEEDIEEIINLTKKIKDNVRKVDVSINPMVP 348
                 GI  V   +++G P ET E I++ +   K++  N R + VS+    P
Sbjct: 331 QDCHELGI-VVHGTFILGLPGETRETIKQTLAFAKEV--NPRTLQVSMAAPYP 380