Pairwise Alignments

Query, 392 a.a., redox-regulated ATPase YchF from Methanococcus maripaludis S2

Subject, 365 a.a., Ribosome-binding ATPase YchF from Xanthobacter sp. DMC5

 Score = 94.7 bits (234), Expect = 4e-24
 Identities = 111/379 (29%), Positives = 163/379 (43%), Gaps = 81/379 (21%)

Query: 5   GLVGKPNVGKSTTFNAMTEKIA-DIGNYPFTTINPNIGTSFVTKPCPCDTLNLKCTPNNS 63
           G+VG PNVGKST FNA+T+  A    NYPF TI PN+G   V  P   DTL        +
Sbjct: 6   GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGDVAVPDP-RLDTL--------A 56

Query: 64  KCFSGMRYIPVEV--IDVAGLVPDAHKGKGMGNKFLDDLRQADAFILVV---DASGKTDL 118
           +       IP  +  +D+AGLV  A KG+G+GN+FL ++R+ DA   VV   +    T +
Sbjct: 57  EIAGSGAIIPTRLTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVVRCFEDGDVTHV 116

Query: 119 EGNPSENNDPVEDVKFLLNELDMWIHGILTKNWERLSRKAQ----QEKNLLKALSEQLSG 174
           EG  +    PV+D++ +  EL +     L K    L +KA+    + K+ L  ++  L  
Sbjct: 117 EGKIA----PVDDIETIETELMLADLESLEKRATALEKKARTLDKEGKDTLDLMTRALVL 172

Query: 175 LNISENQVFAVIKEFDESPMKWTEEDLINVSTNLRKASKPMIIAAN------KADHPDAE 228
           L   +   FA +K          EE+ +     L  A KP++   N      KA +  + 
Sbjct: 173 LREGKPARFAEVKP---------EEERMFSQLGLMTA-KPVLYVCNVEETSAKAGNSLSA 222

Query: 229 KNIEKLKEEFKDFLVIPTSAEIELAL--KNAQKAGLIKYDGKSMEVLDESSLNDAQKNAL 286
           +  E+ K E    +V+    E E+A+     QK  L   D      L+E  LN   +   
Sbjct: 223 QVFERAKLEGAMAVVVSAKIESEIAVLPPEEQKEYLEAID------LEEPGLNRVIR--- 273

Query: 287 NYMKSYLDKFGGTGIQDLINVAYYDLLDMIVVYPVEDEGKFCDKKGNVLPDAYLVKKGAT 346
                                A YDLL ++  + V          G     A+ + KG  
Sbjct: 274 ---------------------AGYDLLHLVTYFTV----------GPKEARAWTITKGTK 302

Query: 347 AKDLAFKIHTEIGQKFIYA 365
           A   A  IHT+  + FI A
Sbjct: 303 APAAAGVIHTDFEKGFIRA 321