Pairwise Alignments

Query, 392 a.a., redox-regulated ATPase YchF from Methanococcus maripaludis S2

Subject, 366 a.a., GTP-binding protein from Pseudomonas simiae WCS417

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 102/371 (27%), Positives = 161/371 (43%), Gaps = 64/371 (17%)

Query: 5   GLVGKPNVGKSTTFNAMTEKIADIGNYPFTTINPNIGTSFVTKPCPCDTLNLKCTPNNSK 64
           G+VG PNVGKST FNA+T+      N+PF TI PN G      P P   L+      N K
Sbjct: 6   GIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSG----IVPMPDPRLDALAAIVNPK 61

Query: 65  CFSGMRYIP--VEVIDVAGLVPDAHKGKGMGNKFLDDLRQADAFILVVDASGKTDLEGNP 122
                R +P  +E +D+AGLV  A KG+G+GNKFL ++R+ DA   VV      ++  + 
Sbjct: 62  -----RILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVI-HV 115

Query: 123 SENNDPVEDVKFLLNELDMWIHGILTKNWERLSRKAQ---QEKNLLKALSEQLSGLNISE 179
           S + DP  D++ +  EL         K  ++++R A+   ++  + K L EQL       
Sbjct: 116 SNSVDPKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTLG 175

Query: 180 NQVFAVIKEFDESPMKWTEEDLINVSTNLRKASKPMIIAANKADHPDAEKN-----IEKL 234
               +++K          +E  +    +L   +KP++  AN A+  D  +N     + K 
Sbjct: 176 KPARSLMKTMG------ADEKAVIKGFHL-LTTKPVMYIANVAE--DGFENNPLLDVVKA 226

Query: 235 KEEFKDFLVIPTSAEIELALKNAQKAGLIKYDGKSMEVLDESSLNDAQKNALNYMKSYLD 294
             + +  +V+P   +IE  +                  LD+    D    AL   +  L+
Sbjct: 227 IADEEGAIVVPVCNKIEAEIAE----------------LDDGEEKDMFLEALGLEEPGLN 270

Query: 295 KFGGTGIQDLINVAYYDLLDMIVVYPVEDEGKFCDKKGNVLPDAYLVKKGATAKDLAFKI 354
           +    G         Y++L++   +            G     A+ VK GATA   A  I
Sbjct: 271 RVIRAG---------YEMLNLQTYFTA----------GVEEVRAWTVKVGATAPQAAGVI 311

Query: 355 HTEIGQKFIYA 365
           HT+  + FI A
Sbjct: 312 HTDFEKGFIRA 322