Pairwise Alignments

Query, 392 a.a., redox-regulated ATPase YchF from Methanococcus maripaludis S2

Subject, 366 a.a., GTP-binding and nucleic acid-binding protein YchF from Sphingobium sp. HT1-2

 Score = 93.6 bits (231), Expect = 8e-24
 Identities = 104/372 (27%), Positives = 156/372 (41%), Gaps = 66/372 (17%)

Query: 5   GLVGKPNVGKSTTFNAMTE-KIADIGNYPFTTINPNIGTSFVTKPCPCDTLNLKCTPNNS 63
           G+VG PNVGKST FNA+TE + A   NYPF TI PN G   V    P D L        S
Sbjct: 6   GIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNEGRVAV----PDDRLQTIARIGGS 61

Query: 64  KCFSGMRYIPVEVIDVAGLVPDAHKGKGMGNKFLDDLRQADAFILVVDASGKTDLEGNPS 123
              + +    +  +D+AGLV  A KG+G+GN+FL ++R+ DA + V+      D+  +  
Sbjct: 62  ---AKIIETQLAFVDIAGLVRGASKGEGLGNQFLANIRETDAIVHVLRCFEDDDIT-HVE 117

Query: 124 ENNDPVEDVKFLLNELDMWIHGILTKNWERLSRKAQQEKNLLKALSEQLSGLNISENQVF 183
              DP+ D + +  EL +     L K    L +K  Q     KA +  L        Q  
Sbjct: 118 GKVDPIADAETVETELMLADLESLEKRVPNLLKKGAQGDKEAKAAASVL-------GQTL 170

Query: 184 AVIKEFDESPMKWT----EEDLINVSTNLRKASKPMIIAANKADHPDAEKN------IEK 233
            +++  D  P + T    EE+    +      +KP++   N  +   AE N       EK
Sbjct: 171 ELLR--DGKPARLTQPRDEEEARLFAQAQLLTAKPVLYVCNVEEGAAAEGNAFSARVFEK 228

Query: 234 LKEEFKDFLVIPTSAEIELALKNAQKAGLIKYDGKSMEVLDESSLNDAQKNALNYMKSYL 293
              E    +++  + E EL     ++ G         E L+   L +A            
Sbjct: 229 AAAENASAVIVSAAIEAELITMPVEERG---------EYLEALGLTEA------------ 267

Query: 294 DKFGGTGIQDLINVAYYDLLDMIVVYPVEDEGKFCDKKGNVLPDAYLVKKGATAKDLAFK 353
                 G+  +I  A Y+LL +I  + V          G     A+ V KG+ A   A  
Sbjct: 268 ------GLARIIR-AGYELLGLITFFTV----------GPKEARAWTVAKGSKAPQAAGA 310

Query: 354 IHTEIGQKFIYA 365
           IH++  + FI A
Sbjct: 311 IHSDFEKGFIRA 322