Pairwise Alignments

Query, 392 a.a., redox-regulated ATPase YchF from Methanococcus maripaludis S2

Subject, 367 a.a., GTP-binding protein from Agrobacterium fabrum C58

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 106/374 (28%), Positives = 158/374 (42%), Gaps = 69/374 (18%)

Query: 5   GLVGKPNVGKSTTFNAMTEKIA-DIGNYPFTTINPNIGTSFVTKPCPCDTLNLKCTPNNS 63
           G+VG PNVGKST FNA+T+  A    NYPF TI PN G   V  P     +        S
Sbjct: 6   GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDP----RMQQLAAIAGS 61

Query: 64  KCFSGMRYIPVEVIDVAGLVPDAHKGKGMGNKFLDDLRQADAFILVVDASGKTDLEGNPS 123
           K     R   +  +D+AGLV  A KG+G+GNKFL ++R+ DA + V+      D+     
Sbjct: 62  KEIIPTR---ISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDDDITHVEG 118

Query: 124 ENNDPVEDVKFLLNELDMWIHGILTKNWERLSRKAQQ-EKNLLKALSEQLSGLNISENQV 182
             N PV D + +  EL       +  + E L R+ +Q  K       E L+ L + E  V
Sbjct: 119 RIN-PVGDAETIETEL-------MLADLESLERRVEQTRKRATSKDKESLAQLPVME-AV 169

Query: 183 FAVIKEFDESPMKWTEEDLINVSTNLRK-----ASKPMIIAANKADHPDAEKN------I 231
            A++   D  P +   + L +    + K      S P++   N ++   +  N       
Sbjct: 170 IALLN--DGKPARLLLKTLADEEIEILKGLNLLTSHPVLYVCNVSEADASSGNEHTAAVA 227

Query: 232 EKLKEEFKDFLVIPTSAEIELALKNAQKAGLIKYDGKSMEVLDESSLNDAQKNALNYMKS 291
           E  K++  + ++I  + E E+A   A +A          E L    LN+A          
Sbjct: 228 EMAKQQGAECVIISAAIEAEVAQLPADEA---------EEFLSALGLNEA---------- 268

Query: 292 YLDKFGGTGIQDLINVAYYDLLDMIVVYPVEDEGKFCDKKGNVLPDAYLVKKGATAKDLA 351
                   G+  LI   Y+ LLD+I  + V          G     A+ + +G  A   A
Sbjct: 269 --------GLDRLIRAGYH-LLDLITYFTV----------GPKETRAWTIVRGTKAPAAA 309

Query: 352 FKIHTEIGQKFIYA 365
             IHT+  + FI A
Sbjct: 310 GVIHTDFERGFIRA 323