Pairwise Alignments

Query, 614 a.a., ATP-binding protein from Methanococcus maripaludis S2

Subject, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

 Score =  145 bits (366), Expect = 7e-39
 Identities = 100/361 (27%), Positives = 183/361 (50%), Gaps = 33/361 (9%)

Query: 279 GTPKSPFTALLNSVIQKIFFIAFSSLIIAVFVAVILNKKIVDSIKKLKNSAESFGRGNYD 338
           GT    +  L  S++  +  +A S L+     A+ +++ I D I+++K++      G+ +
Sbjct: 161 GTLLRGYRNLFTSLLLILACLALSGLL-----ALRMSRTINDPIERIKHAVNQLKDGHLE 215

Query: 339 ERASIDTGDELEELAESFNKMADEIGKSDKKL-----------KSDAHTLKTSFDELK-- 385
           ER       EL+ELA   N+MA+ +  + ++L           + +  T++    EL   
Sbjct: 216 ERLPTMGSHELDELAHGINRMAETLQNAHEELQHSIDQATEDVRQNLETIEIQNIELDMA 275

Query: 386 -----EVDNLKSEILSIVSHELRTPLTAILGYVELLKDETAGKLSEKQKEFISVISENSD 440
                E   +KSE L+ +SHE+RTPL  ILG+  LL+     +++ +Q ++++ I +++D
Sbjct: 276 RKEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKS---EMTPRQLDYLNTIEKSAD 332

Query: 441 RLKRITDNMSDLVTVDNKILDIKRDRINLKKEVNDILRSFDYFAESKNIVLLEDVDN--- 497
            L  I + + D   ++   L +     NL+  + D L      A +K + LL  +     
Sbjct: 333 NLLGIINEILDFSKIEAGKLVLDSIPFNLRDLIQDTLTILAPAAHAKQLELLSLIYRDTP 392

Query: 498 LDIKGDKSKIHQVLSNLIENAIKFSKKQTKVTVMGFEDK----GNIHLEITDQGPGIPKE 553
             + GD  ++ Q+L+NL+ NAIKF+++ T V     ED+      + + + D G G+  +
Sbjct: 393 ASLVGDPLRLKQILTNLVSNAIKFTREGTIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQ 452

Query: 554 HLGKIFDKFYQIDSSSKREVGGSGLGLAVCKKIVESHGGSIWVESKIGKGTTVHVMFPLI 613
            +  +F  F Q D+S  R+ GG+GLGL + K+++E  GG I V+S  G+G+   +   L 
Sbjct: 453 DVRTLFQAFSQADNSLARQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSQFWISLNLP 512

Query: 614 K 614
           K
Sbjct: 513 K 513