Pairwise Alignments

Query, 614 a.a., ATP-binding protein from Methanococcus maripaludis S2

Subject, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

 Score =  247 bits (631), Expect = 1e-69
 Identities = 168/532 (31%), Positives = 275/532 (51%), Gaps = 23/532 (4%)

Query: 9   IGTKLLIFSIIIVLIPIVMMSYVSTDTISDLMTSNQESELDINLGILNERMDSVLVEFDT 68
           IGTKLLIFSII V+IPI ++  VS +TI+  M      +L+ +  + N  MDS   E  T
Sbjct: 8   IGTKLLIFSIITVIIPIAILGIVSNNTITQDMKEQSADKLESSNEMANTIMDSRFTELCT 67

Query: 69  MTAYTADLPVVVNAVKNNDKDTLQDFANGLEDQSWIDLAVFTDADGNVICASYGDDNAEI 128
           +  Y +    V  ++K  + D L+  A  L+  S  DL +FT   G+ I +S G+    +
Sbjct: 68  LAEYASYTQGVKTSIKTGNVDDLELRAETLKSASNADLVIFTGNGGSTIASSSGE-GITL 126

Query: 129 SSYVKKLLEKNTIYAYDILPNEEASKYSEYELDGND-ALTIFTVAPIYDGNSLIGTVTYV 187
            S + K+ + +    ++ +P + A K+S+ ++ G D AL+I    PIYD    +G V ++
Sbjct: 127 DSTILKVSKSSEKSGFEKIPEQTALKFSDADVTGTDSALSIVVAYPIYDDAGTLGYVAFI 186

Query: 188 DIMNKDDYWVDRVKEVTGDEASIYLNNVRISTTCIKDGVDFVGELADEDIYETVSKKQ-D 246
           D++N D   VD +K  TGDE++++L N RIST+ +      VG  A + +Y TV K+  +
Sbjct: 187 DVLNNDHTLVDSIKASTGDESTLFLENYRISTSVVSGNSRAVGTTASDVVYNTVVKENTE 246

Query: 247 VRSTVTINGVPYLAKYSPIYNIDGEVIGMTCVGTPKSPFTALLNSVIQKIFFIAFSSLII 306
              +  + G  +L KY P+ + +G  IGM  VGTP++ FT L+N+       IA   L+I
Sbjct: 247 FMGSANVVGQSFLTKYVPLKDSNGATIGMVFVGTPEAQFTQLVNNARNNTIIIALFGLLI 306

Query: 307 AVFVAVILNKKIVDSIKKLKNSAESFGRGNYDERASIDTGDELEELAESFNKMADEIGKS 366
           AV ++++ ++ I   I +L++    FG G+YD   ++ TGDELEELA SFNKMA +I + 
Sbjct: 307 AVVISLVSSRSITKPINQLEDGVHKFGSGDYDHTINVKTGDELEELANSFNKMAKDIKEL 366

Query: 367 DKKLKSD----AHTLKTSFDELKEVDNLKSEILSIVSHELR--TPLTAILGYVELLKDET 420
              L +D    A TLK  FD +   D+L     S+ + E R    L   + +      E 
Sbjct: 367 HSMLDADKLSLAKTLKEIFDIM---DHLAEGDFSVRADENRHKNKLQKTINHA----IEN 419

Query: 421 AGKLSEKQKEFISVISEN----SDRLKRITDNMSDLVTVDNKILDIKRDRINLKKEVNDI 476
             K+ E  K  I+V+S+      + LKR  +    +    N++     D+    ++ +D 
Sbjct: 420 VSKMMENLKSEITVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDE 479

Query: 477 LRSFDYFAESKNIVLLEDVDNLDIKGDKSKIHQVLSNLIENAIKFSKKQTKV 528
           L   +  A++ ++V  +   ++D   +     +     +ENAI   +K T V
Sbjct: 480 L---EKTAKAADMVYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNV 528



 Score = 30.4 bits (67), Expect = 3e-04
 Identities = 75/319 (23%), Positives = 121/319 (37%), Gaps = 47/319 (14%)

Query: 89  DTLQDFANGLEDQSWIDLAVFTDADGNVICASYGDDNAEISSYVKKLLEKNTIYAYDILP 148
           D L+D   GL+        V TDA  N +  +  D +A++     +L  + T  A D++ 
Sbjct: 436 DELEDVGEGLKRAKETSEQV-TDA-ANQVATAAADQSAKLQDTSDEL--EKTAKAADMVY 491

Query: 149 NE-EASKYSEYELDGNDALTIFTVAPIYDGNSLIGTVTYVDIMNKDDYWVD----RVKEV 203
           N+ E S  S  E+  N    +  V    D    I  V  +D + K    +     ++ EV
Sbjct: 492 NDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNV--IDELGKSIQELGEESKKINEV 549

Query: 204 T------GDEASIYLNNVRISTTCIKDGVDFVGELADE--DIYETVSKK-QDVRSTVTIN 254
           T       ++  +   N  I      D       +A E   + E + K  +D+  T  IN
Sbjct: 550 TVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRT--IN 607

Query: 255 GVPYLAKYSPIYNIDG--EVI-GMTCVGTPKSPFTALLNSVIQKIFFIAFSSLIIAVFVA 311
           G+    + +    + G  EV  G+  +    S F  +  SV      IA           
Sbjct: 608 GINKKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIA----------- 656

Query: 312 VILNKKIVDSIKKLKNSAESFGRGNYDERASID-----TGDELEELAESFNKMADEIGKS 366
                +I D+ K   N+ +   R N  + ASI      T +EL   +E  N+  +EI  S
Sbjct: 657 -----QIKDNAKNASNNTQEALR-NVQDIASISEEFAATAEELTASSEEQNRAVEEIDAS 710

Query: 367 DKKLKSDAHTLKTSFDELK 385
            +K+   +  L    DE K
Sbjct: 711 AEKMMEISRKLAEDADEFK 729