Pairwise Alignments

Query, 350 a.a., M42 family metallopeptidase from Methanococcus maripaludis S2

Subject, 394 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 54.3 bits (129), Expect = 5e-12
 Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 22/251 (8%)

Query: 4   LDYLKILATEK----GISGREDNIREYMKKELEKYCDSIETDKFGNLIA--KKGSTGPKI 57
           LDYLK +  E       +G  D I  Y+ + L++     E  + G + A  K     P  
Sbjct: 10  LDYLKRVLLEMLAIPSPTGFTDTIVRYVAERLDELGIPFELTRRGTIRATLKGRQATPDR 69

Query: 58  MIASHMDEIGLMVKYIDDKGFLKFTKIGGINDQMLLNQKVIVHGN----NGDIVGVLGSK 113
            +++H+D IG  V+ + D G L    +G  + +     +V V  +     G ++ ++ S 
Sbjct: 70  AVSAHLDTIGASVRQLQDNGRLALAPVGCWSSRFAEGSRVSVFTDTGVFRGSVLPLMAS- 128

Query: 114 PPHKMKESERNKLISAEHMFIDIGA--KNREEAEKMGVEIGTAMSFKSEFDNLGGNVVSC 171
             H    +     IS +H+ + + A    R + E +GV IG  ++F    +      +S 
Sbjct: 129 -GHAFNTAIDQMPISWDHVEVRLDAYCATRADCEALGVSIGDFVAFDPLPEFTESGHISA 187

Query: 172 KSFDNRAGCAVVLKTMELLKDMDLK--CQVYAVGTVQEEVGLKGAKTSAFGINP-DVAFA 228
           +  D++AG A +L  ++ + +   +     + + T+ EE G     + A G  P DV+  
Sbjct: 188 RHLDDKAGVAALLAALKAVVESGRQPLIDCHPLFTITEETG-----SGAAGALPWDVSEF 242

Query: 229 LDVTICGDHPG 239
           + + I    PG
Sbjct: 243 VGIDIAPVAPG 253