Pairwise Alignments

Query, 362 a.a., ADP-forming succinate--CoA ligase subunit beta from Methanococcus maripaludis S2

Subject, 388 a.a., succinyl-CoA synthetase, beta subunit glutaryl-CoA synthetase, beta subunit from Pseudomonas putida KT2440

 Score =  234 bits (597), Expect = 3e-66
 Identities = 139/383 (36%), Positives = 214/383 (55%), Gaps = 25/383 (6%)

Query: 1   MKLHEYEAKEIFKENNIPIPKNKLVSGKVESIDY-------PVVIKAQVLVGGRGKAGGI 53
           M LHEY+ K++F E  +P+ K   V    ++ +          V+KAQV  GGRGKAGG+
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEQAAEACDKIGGNEWVVKAQVHAGGRGKAGGV 60

Query: 54  LFADNVDDANEKIESLIGNTV-------KGELVEKVLLEEQIKIVKEYYVGVVVNRNEKN 106
               + +DA       +G  +        G+ V K+L+E    I KE Y+G VV+R+ + 
Sbjct: 61  KLVRSKEDAKAFAAQWLGKNLVTYQTDANGQPVSKILVESCTDIAKELYLGAVVDRSSRR 120

Query: 107 NVVIFSTEGGVDIEEVASKTPEKIIKLSLNPEKEFLPYLARGMLKKAGIPSAEIPKVADV 166
            V + STEGGVDIE+VA +TPEKI+K +++P     P+  R +  + G+   ++ + A +
Sbjct: 121 IVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPFQGRELAFQLGLEGKQVQQFAKI 180

Query: 167 LCKVYKAFKNMDGILAEINPLVFTEDGKIIAADAVLNVDDDAYFRH-NYEKFEEFNKQE- 224
              + K FK+ D  L E+NPLV   DG +   DA +N+D +A +R    + F + ++ + 
Sbjct: 181 FVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLKTFHDPSQDDA 240

Query: 225 ------KSEFAYVELDGDIAVIGNGAGLTLASMDIVKEFGGNPACFLDVGGGSNRETVKK 278
                 K E  YV L+G+I  + NGAGL + +MDIV   GG PA FLDVGGG+ +E V +
Sbjct: 241 REAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE 300

Query: 279 ALLKATSRKNVKGAFINILGGITRCDEVSMGIVDVLKE-NPNLKFAVRMMGTNEEEGRRI 337
           A     S  NV    +NI GGI RCD ++ GI+  +KE    +   VR+ G N E G ++
Sbjct: 301 AFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGNNAELGAKV 360

Query: 338 LSENGISF--ESSMEGAAKALTE 358
           L+E+G++    +S+  AA+ + +
Sbjct: 361 LAESGLNIIAATSLTDAAQQVVK 383