Pairwise Alignments

Query, 304 a.a., AEC family transporter from Methanococcus maripaludis S2

Subject, 301 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 69.7 bits (169), Expect = 8e-17
 Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 15/297 (5%)

Query: 4   MEIMYVIVFLILIGYISRHFKILDEKDRMVLNKIVIYIAMPATIFLQLLTNVAPSDLPEF 63
           M  + +IV  ++IG + R    L +         VI +A+PAT     L +V    + + 
Sbjct: 1   MHEISLIVTCLVIGVLLRWSGRLPDTATKAFGGWVINVALPATA----LRSVHQLKMDDG 56

Query: 64  MKLPIIIFISTAACALLAYIAGKR-LKLDNKSLGGFVLVASIGNTGFLGYPVILGFYGEQ 122
             L        A  A+L  +   R     ++  G  +LV   GNT F+G P+I  F G Q
Sbjct: 57  WWLAAATPWIGAILAILVIVPLCRAFGWSHRRAGALLLVGGWGNTSFVGLPMIAAFAGSQ 116

Query: 123 GLLRAIFCDMSAIFCSM-LLGTYIGVKLSGAK---KSILKEVFTFPPLFTGIFTLILVLL 178
            L   I  D+   + ++  LG  I    S      +++ K + TFPP     F  IL+  
Sbjct: 117 WLGLGIVIDLFGSYLALSTLGLAIAAVASAGHFDGRAVAKRIATFPP-----FWAILIAF 171

Query: 179 HVNLSIFPEFFTKSLEYMSSATIPLIMLSLGLSLSPKAAKFGIFYGILASIFRMVISPLV 238
             N    PE+  + +E ++    P+ + ++G +L        +    +   +R++++PL 
Sbjct: 172 STNDVPRPEWLDQLVEALARTLTPIALAAVGYALRLDRISGRVGALAVGLGYRLLLAPLA 231

Query: 239 AFPISESILSN-QLDKQVTIMQSAMPSAMMPLVYAVIYDLDVKLVASACFVSTVVSL 294
            F +  ++  N     QV +++ AMP  +   + A+ +DL+  LVA    V   +S+
Sbjct: 232 IFLMYAALGRNGDPVAQVAMLEMAMPPMLGASIIALDHDLEADLVALVIGVGVPLSM 288