Pairwise Alignments

Query, 304 a.a., AEC family transporter from Methanococcus maripaludis S2

Subject, 314 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 66/301 (21%), Positives = 133/301 (44%), Gaps = 18/301 (5%)

Query: 10  IVFLILIGYISRHFKILDEKDRMVLNKIVIYIAMPATIFLQLLTNVAPSDLPEFMKLPII 69
           I+ ++L+GY S   +   E      NK+V+  A+PA +F+  +T      +    +L ++
Sbjct: 12  IIVIMLLGYFSGRRETFSEDQARAFNKLVLNYALPAALFVS-ITRANREMIFADTRLTLV 70

Query: 70  IFISTAACALLAYI-AGKRLKLDNKSLGGFVLVASIGNTGFLGYPVILGFYGEQ---GLL 125
             +    C   ++    K  K  +       L+A     GFLG+ V+   YG+    GL+
Sbjct: 71  SLVVIVGCFFFSWFGCYKFFKRTHAEAAVCALIAGSPTIGFLGFAVLDPIYGDSVSTGLV 130

Query: 126 RAIFCDMSAIFCSMLLGTYIGVKLSGA---KKSILKEVFTF---PPLFTGIFTLILVLLH 179
            AI   +     ++ +G Y+    SGA   K S L  + +    P ++  +   ILVL+ 
Sbjct: 131 VAII-SIIVNAITIPIGLYLLNPSSGADGKKNSNLSALISAAKEPVVWAPVLATILVLVG 189

Query: 180 VNLSIFPEFFTKSLEYMSSATIPLIMLSLGLSLSPKAAKFGIFYGILASIF-RMVISPLV 238
           V +   P  +  +   ++ A   + + + GL+L+  A KF     I  + F ++++ PL 
Sbjct: 190 VKI---PAAWDPTFNLIAKANSGVAVFAAGLTLA--AHKFEFSAEIAYNTFLKLILMPLA 244

Query: 239 AFPISESILSNQLDKQVTIMQSAMPSAMMPLVYAVIYDLDVKLVASACFVSTVVSLFALP 298
              +  +   N    Q+ ++  A+P A   ++ A  +++  +   ++  VS +  +   P
Sbjct: 245 LLFVGMACHLNSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGTASLAVSVLGFVVTAP 304

Query: 299 I 299
           +
Sbjct: 305 L 305